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16 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus			RPKM
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53		BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE37184	Dynamic binding of RBPJ is determined by Notch signalling status	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33		BED RPKM WIG SRA Run Selector	Arjen Brinkman	May 13, 2013
GSE43988	The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	9		BED CSV RPKM	Dimple Chakravarty	Dec 01, 2014
GSE53093	KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	61		BED BEDGRAPH RPKM	Benjamin L Kidder	Jan 27, 2014
GSE63282	ChIP-seq and RNA-seq analyses identify Wnt and Fgf signaling pathways as Prep1 targets in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	4		BED RPKM SRA Run Selector	Hans-Jörg Warnatz	Apr 01, 2015
GSE73124	Genome wide profiling of the RNAPII, γH2AX, H3K4Me1, H3K4M2 and H3K4Me3 in MLL2 F/F and FC/FC MEF cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	52		BED RPKM TXT SRA Run Selector	Theo Kantidakis	Apr 13, 2016
GSE73130	Mutation of cancer driver MLL2 results in transcription stress and genome instability	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	62		BED RPKM	Theo Kantidakis	Apr 13, 2016
GSE109012	CHD4 and the NuRD complex directly control cardiac sarcomere formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21		BED BW RPKM TXT SRA Run Selector	Austin J Hepperla	May 15, 2018
GSE138698	An engineered IL-2 partial agonist promotes CD8+ T cell stemness	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	71		BED RPKM SRA Run Selector	Peng Li	Jul 06, 2021
GSE162739	BAP1 activity regulates Polycomb occupancy and global chromatin condensation counteracting diffuse PCGF3/5-dependent H2AK119ub1 deposition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	192		BED RPKM TSV TXT SRA Run Selector	Federico Rossi	Jun 27, 2021
GSE35681	ChIP-seq and mRNA-seq experiment to find the direct target genes of ATF4 and CHOP	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10		BEDGRAPH RPKM SRA Run Selector	Maureen A Sartor	Apr 11, 2013
GSE40463	STATs Shape the Active Enhancer Landscape of T Cell Populations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42		BEDGRAPH BIGWIG RPKM SRA Run Selector	Golnaz Vahedi	Nov 24, 2012
GSE94086	SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27		BEDGRAPH RPKM	Benjamin L Kidder	Jun 12, 2017
GSE48963	Targeting H3K4 methylation as a therapeutic strategy for Huntington's disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32		BW RPKM	Christopher Ng	Jul 18, 2013
GSE247343	Tyrosine phosphorylation of both STAT5A and STAT5B is necessary for maximal IL-2 signaling and its mitogenic action	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57		BW RPKM	Peng Li	May 10, 2024
GSE45975	Bach2 represses effector programmes to stabilize Treg-mediated immune homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12		RPKM TXT WIG SRA Run Selector	Golnaz Vahedi	Jun 27, 2013