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6264 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		SRA Run Selector
GSE160313	In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8+ T cell fate decisions [Pofut1 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Hongbo Chi	Feb 25, 2021
GSE75547	Determine the effects of Hdac3 deletion on H3K27ac profiles in murine chondrocytes[ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Jennifer Jane Westendorf	Aug 10, 2016
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE99154	H3K36me3 protects the mouse epigenome from single nucleotide variations [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Jin Sun	Aug 01, 2019
GSE69179	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH SRA Run Selector	Mark B Meyer	Jun 03, 2015
GSE118440	2-hydroxyglutarate inhibits transcription factor mediated differentiation by preventing H3K9 demethylation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BW SRA Run Selector	Richard Koche	Jun 10, 2019
GSE96591	2.5 dpc Uterus Chip-Seq of Kdm4a mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	WIG SRA Run Selector	Aditya Sankar	Aug 17, 2017
GSE126112	3D ATAC-PALM: Super-resolution Imaging of the Accessible Genome	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	14	BW HIC MCOOL TXT SRA Run Selector	Robert Tjian	Jan 29, 2020
GSE126010	3D Chromosome Structure Can Reveal Stem Cell Signatures (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Ji Wu	Jan 20, 2022
GSE137771	3D chromosome structure reveals unique signatures involved in mouse female germline stem cells and their development	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	NARROWPEAK TXT SRA Run Selector	Ji Wu	Jan 20, 2022
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE77645	4C-ker: A method to reproducibly identify genome-wide interactions captured by 4C-Seq experiments	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH TXT SRA Run Selector	Jane Skok	Feb 27, 2016
GSE111190	4Cseq analysis of neural stem/progenitor cells (NSC) from wild type and Sox2-deleted mouse neonatal forebrain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH SRA Run Selector	Federico Zambelli	Mar 07, 2019
GSE184600	4DNESOUYRIO9 - sci-ATAC-seq on mESCs differentiated to embryoid body	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	TXT SRA Run Selector	4DN DCIC	Sep 24, 2021
GSE95627	5-hydroxymethylcytosine Accumulation in Postmitotic Neurons Results in Functional Demethylation of Expressed Genes [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	TXT SRA Run Selector	Marian Mellen	Aug 29, 2017
GSE95622	5-hydroxymethylcytosine Accumulation in Postmitotic Neurons Results in Functional Demethylation of Expressed Genes [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Marian Mellen	Aug 29, 2017
GSE95600	5-hydroxymethylcytosine Accumulation in Postmitotic Neurons Results in Functional Demethylation of Expressed Genes [ORGANIC ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Marian Mellen	Aug 29, 2017
GSE166423	5-hydroxymethylcytosine is required for terminal differentiation of Purkinje neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	Elitsa Stoyanova	Sep 01, 2021
GSE133805	53BP1 Enforces Distinct Pre- and Post-resection Blocks on Homologous Recombination (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW SRA Run Selector	Wei Wu	Oct 22, 2019
GSE48519	5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	92	BW TAB TXT SRA Run Selector	Gary Chung Hon	Sep 25, 2014