GEO Browser - GEO

Series

Samples

Platforms

DataSets

6264 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		SRA Run Selector
GSE36375	Rev-erb(alpha) and (beta) Coordinately Protect the Circadian Clock and Normal Metabolic Function	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED TXT SRA Run Selector	Logan J Everett	Mar 09, 2012
GSE61775	Context-specific regulation of BMAL1 target genes during the circadian cycle in mammals	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	58	BED BW WIG SRA Run Selector	Jonathan Aryeh Sobel	Dec 31, 2016
GSE63286	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription [ChIP-Seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	NARROWPEAK TXT SRA Run Selector	Andrew Johnston	Mar 21, 2020
GSE68400	Regulation of nucleosome architecture and factor binding revealed by nuclease footprinting of the ESC genome	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BEDGRAPH SRA Run Selector	Sarah J Hainer	Aug 27, 2015
GSE73833	Humanized PRDM9 Mouse Testis H3K4me3 and DMC1 ChIP-seq	Third-party reanalysis Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	TXT VCF SRA Run Selector	Nicolas Altemose	Feb 02, 2016
GSE88699	High activity of a broad panel of housekeeping and tissue-specific cis-regulatory elements depends on a subset of ETS proteins	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED BIGWIG TXT SRA Run Selector	Alberto Termanini	Mar 13, 2017
GSE94418	Transcriptional regulation of tDNA in H9 ESCs	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	CSV TSV TXT SRA Run Selector	keith e giles	Feb 02, 2020
GSE98092	Mammalian low cell number and in vivo DamID-seq for transcription factor binding analyses	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	58	BIGWIG SRA Run Selector	Keisuke Kaji	Mar 13, 2018
GSE99921	Extensive sex differences at the initiation of meiotic recombination	Third-party reanalysis Other Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BAM BED BEDGRAPH SRA Run Selector	Kevin Brick	Sep 20, 2018
GSE99991	Investigating the role of SMCHD1 in de novo X chromosome inactivation	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH BW TXT SRA Run Selector	Chen-Yu Wang	Jun 07, 2018
GSE101397	Rapid chromatin switch in the direct reprogramming of fibroblasts to neurons	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	TXT SRA Run Selector	Qian Yi Lee	Sep 25, 2017
GSE102393	Nuclear receptor Nur77 limits the macrophage inflammatory response by reprogramming mitochondrial metabolism (ChIP-seq)	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED BIGWIG TXT SRA Run Selector	Carlie de Vries	Aug 21, 2018
GSE111902	Compendium of CD8+ T cell Data	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	67	BROADPEAK BW NARROWPEAK TSV TXT SRA Run Selector	Robert Anthony Amezquita	Mar 17, 2018
GSE112110	Genome wide map of DMC1 in testis of Stag3-/-, Rec8-/- and Stag3-/-Rec8-/- mice.	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BEDGRAPH TXT SRA Run Selector	Mary Ann Handel	Mar 07, 2019
GSE116413	Unfolding the inactive X chromosome	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	42	BEDGRAPH BW TXT SRA Run Selector	Chen-Yu Wang	May 03, 2019
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE129025	A chondrocyte-specific Indian hedgehog enhancer activated in both skeletal development and postnatal cartilage degeneration [ChIP-seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Shinsuke Ohba	Mar 31, 2020
GSE129156	Genome-wide maps of H3K9me3 in hematopoietic stem cells from Kdm4a, b, c triple knockout mice	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX SRA Run Selector	Karl Agger	Apr 02, 2019
GSE137305	An Xist-dependent protein assembly mediates Xist localization and gene silencing	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	BW SRA Run Selector	Kathrin Plath	Sep 03, 2020
GSE141516	Genome-wide maps of ZCWPW1 in HEK293T cells with or without PRDM9, plus DMC1 ChIP-seq in ZCWPW1 KO mouse	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	BED BEDGRAPH BIGWIG XLS SRA Run Selector	Simon Myers	Aug 01, 2020