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873 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TSV
GSE160313	In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8+ T cell fate decisions [Pofut1 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Hongbo Chi	Feb 25, 2021
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE207565	A Bipartate function of ESRRB integrates signaling over time to balance self-renewal and differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BW TSV	Josh M Brickman	Apr 18, 2023
GSE225554	A Cellular Atlas of the Down Syndrome Brain Identifies Accelerated Oligodendrocyte Precursor Cell Senescence	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	H5 MTX TBI TSV	Brian Kalish	Sep 14, 2023
GSE133417	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BW MTX NARROWPEAK TSV	Caleb Lareau	Dec 31, 2021
GSE133404	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_ATACseq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED TSV SRA Run Selector	Caleb Lareau	Dec 31, 2021
GSE133409	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1 [G1E_ChIPseq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BW NARROWPEAK TSV SRA Run Selector	Caleb Lareau	Dec 31, 2021
GSE213020	A Cre-deleter specific for embryo-derived brain macrophages reveals distinct features of microglia and border macrophages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	H5 TSV	Julia Belk	Feb 02, 2023
GSE212002	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	120	BW MTX TSV TXT	Chen Wang	Jan 20, 2023
GSE253593	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	JPG MTX TSV	Brent Hanks	May 13, 2024
GSE253589	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED MTX TSV	Brent Hanks	May 13, 2024
GSE210639	A Mesp1-dependent developmental breakpoint in transcriptional and epigenomic specification of early cardiac precursors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	MTX TSV	Alexis Leigh Krup	Apr 07, 2023
GSE200062	A SOX2 engineered epigenetic silencer factor represses the glioblastoma genetic program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	41	BED NARROWPEAK TSV	Luca Massimino	Aug 10, 2022
GSE219110	A SOX9-B7x axis safeguards dedifferentiated tumor cells from immune surveillance to drive breast cancer progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BW MTX NARROWPEAK TSV TXT	Wenjun Guo	Oct 16, 2023
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE245549	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BW MTX TAB TSV	Shuchang Liu	Jun 06, 2024
GSE245538	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis [Set1.Sc-ATAC-Seq retina E14.5 WT retina]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	Shuchang Liu	Jun 06, 2024
GSE159648	A coregulator shift, rather than the canonical switch, underlies thyroid hormone action in liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG TSV TXT SRA Run Selector	Mitchell Lazar	Jan 01, 2021