GEO Browser - GEO

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250 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus
GSE226498	Epigenetic evolution of the Ly49 gene family [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	27	BW	Changxu Fan	Apr 20, 2024
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE244206	ATAC and histone H3K9me3 landscapes reveal long-term epigenomic effects of fetal-neonatal iron deficiency in rat hippocampus [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	16	TXT	Aarthi Ramakrishnan	Mar 14, 2024
GSE244207	ATAC and histone H3K9me3 landscapes reveal long-term epigenomic effects of fetal-neonatal iron deficiency in rat hippocampus [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	16	TXT	Aarthi Ramakrishnan	Mar 14, 2024
GSE244208	ATAC and histone H3K9me3 landscapes reveal long-term epigenomic effects of fetal-neonatal iron deficiency in rat hippocampus	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	32		Aarthi Ramakrishnan	Mar 13, 2024
GSE210321	Identification of regulatory elements in primary sensory neurons involved in physical injury-induced neuropathic pain	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	9	CSV	Kimberly E Stephens	Mar 11, 2024
GSE241559	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	16	BED BIGWIG NARROWPEAK TXT XLS	Fabian Michael Kern	Feb 23, 2024
GSE241561	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	33	BIGWIG MTX NARROWPEAK RESULTS TSV	Fabian Michael Kern	Feb 23, 2024
GSE236748	Mechanism of RUNX1 targeted AKT3 regulated alveolar procoagulant fibrinolytic inhibition in ARDS	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	XLSX	Tongjian Zhao	Jan 31, 2024
GSE247955	Schwann cell regulation by NR2F2 using Cut&Run	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	7	BED BEDGRAPH	John Svaren	Jan 01, 2024
GSE225371	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	14	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE225538	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [III]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE245740	Genome-wide map of FOXO1-bound chromatin in pituitary somatotropes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW	Buffy Sue Ellsworth	Dec 14, 2023
GSE183840	Single cell transcriptomics and chromatin accessibility profiling elucidate the kidney protective mechanism of mineralocorticoid receptor antagonism [snATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	9	RDS TXT SRA Run Selector	Katalin Susztak	Nov 17, 2023
GSE183842	Single cell transcriptomics and chromatin accessibility profiling elucidate the kidney protective mechanism of mineralocorticoid receptor antagonism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	47		Katalin Susztak	Nov 17, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE232960	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BW	Miao Cui	Oct 13, 2023
GSE232963	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	12	BW H5 PNG	Miao Cui	Oct 13, 2023
GSE245064	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	18	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE245067	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023