24 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filtersynthetic construct Remove filterTXT
GSE13622
The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome
8 Desiree Tillo Dec 18, 2008
GSE30992
An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming
16 Xinchen Wang Sep 15, 2011
GSE62777
Integrative analyses of human reprogramming reveal dynamic nature of induced pluripotency
317 Shannan Ho Sui Jul 16, 2015
GSE84888
Distinct roles for motif affinity, chromatin state, and co-regulatory motifs in PPARγ binding and enhancer activity
21 Sharon R Grossman Feb 03, 2017
GSE109262
Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells
244 Felix Krueger Jan 17, 2018
GSE118118
A combination of transcription factors mediates inducible interchromosomal contacts
123 Seungsoo Kim Aug 05, 2018
GSE118725
Systematic Analysis of Transcription Factors Binding to Noncoding Variants
11359 Yunjiang Qiu Oct 28, 2020
GSE126918
Loss of CHD1 promotes chromatin dysregulation leading to heterogeneous mechanisms of resistance to hormone therapy in prostate cancer
453 Ping Mu Mar 26, 2020
GSE157139
CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters
138 Danny Reinberg Feb 06, 2022
GSE180158
Sequence determinants of human gene regulatory elements
80 Teemu Kivioja Nov 12, 2021
GSE184454
Transcription factor paralogs orchestrate alternative gene regulatory networks by context-dependent cooperation with multiple cofactors
61 Siqian Feng May 23, 2022
GSE188405
A cis-regulatory lexicon of DNA motif combinations mediating cell type-specific gene regulation
90 Margaret Guo Aug 17, 2022
GSE215065
Regulation of mouse chamber selective enhancers
82 Xiaoran Zhang Jan 30, 2023
GSE229586
Unbiased transcription factor CRISPR screen identifies ZNF800 as master repressor of enteroendocrine differentiation.
20 Jeff DeMartino Oct 26, 2023
GSE247432
Systematic Dissection of Sequence Features Affecting the Binding Specificity of a Pioneer Factor Reveals Binding Synergy Between FOXA1 and AP-1
53 Lu Bai Nov 09, 2023
GSE52523
Large-scale characterization of DNA binding landscape of eukaryotic C2H2 zinc fingers
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
734 Hamed S Najafabadi Feb 17, 2015
GSE123645
Super-enhancer driven MYST family histone lysine acetyltransferases are critical for nasopharyngeal carcinoma cell growth and survival
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
9 Sizun Jiang Nov 21, 2022
GSE139199
Shape of promoter antisense RNAs regulates ligand-induced transcription activation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
101 MICHAEL G ROSENFELD Mar 24, 2021
GSE139417
Functional enhancers shape extrachromosomal oncogene amplifications
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
20 Peter Scacheri Nov 25, 2019
GSE213876
Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
67 Xiaolong Cui Dec 28, 2023