GEO Browser - GEO

Series

Samples

Platforms

DataSets

732 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana
GSE11657	The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation: ChIP-seq data	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	TAR XLS	Jean-Jack M. Riethoven	Dec 07, 2010
GSE11658	The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	12	CEL TAR XLS	Jean-Jack M. Riethoven	Dec 07, 2010
GSE14600	Target genes of the MADS transcription factor SEPALLATA3, ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT SRA Run Selector	Gerco Angenent	Apr 21, 2009
GSE14636	Target genes of the MADS transcription factor SEPALLATA3	Genome binding/occupancy profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	9	BAR CEL TXT	Gerco Angenent	Apr 21, 2009
GSE16940	An effective approach for identification of in vivo protein–DNA binding sites from paired-end ChIP-Seq data	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	1	BED TXT SRA Run Selector	dabing zhang	Jun 04, 2010
GSE20176	Orchestration of Floral Initiation by APETALA1	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	SOA SRA Run Selector	Gerco Angenent	Apr 02, 2010
GSE21301	Orchestration of development by the bifunctional transcription factor, APETALA2	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	BED GFF SRA Run Selector	Felix Ott	Apr 13, 2010
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	CEL TXT	matteo Pellegrini	May 29, 2010
GSE21821	Relationship between nucleosome positioning and DNA methylation: Bisulfite-Seq, ChIP-Seq, and Mnase-Seq	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Homo sapiens	4	TXT SRA Run Selector	matteo Pellegrini	May 29, 2010
GSE22276	Genome-wide maps of histone modifications in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	20	BED GPR SRA Run Selector	Misook Ha	Feb 02, 2011
GSE22411	Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT SRA Run Selector	Hume Stroud	Jul 21, 2010
GSE24568	A biophysical DNA binding model for the LEAFY transcription factor reveals the evolutionary fluidity of its binding sites	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	BED TXT SRA Run Selector	Felix Ott	May 13, 2011
GSE25446	Genome-wide comparison of H3K27me3 difference between ref6-1 and wild type Col	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT WIG SRA Run Selector	Falong Lu	May 25, 2011
GSE25447	Jumonji C domain-containing protein 12 is a Histone H3 Lysine 27 Demethylase	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	CEL TXT WIG	Falong Lu	May 25, 2011
GSE26722	Role of class III HD‐ZIP transcription factors in shade signaling	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	BED TXT SRA Run Selector	Stephan Wenkel	Jun 01, 2012
GSE28398	Histone modifications of Arabidopsis thaliana (aerial tissue)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	12	BED SRA Run Selector	Chongyuan Luo	Jun 06, 2011
GSE30616	[E-MTAB-587] PCR_artifacts	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	3	SRA Run Selector	European Bioinformatics Institute	Jul 14, 2011
GSE30711	ChIP-Seq data from Arabidopsis thaliana under dark and far-red light	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	BED SRA Run Selector	Bosheng Li	Aug 02, 2011
GSE30713	Genome-wide Binding Site Analysis of FAR-RED ELONGATED HYPOCOTYL 3 Reveals Its Novel Function in Arabidopsis Development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	18	BED CEL	Bosheng Li	Dec 31, 2011
GSE33120	Functional characterisation of SVP by a Chromatin Immunoprecipitation sequencing approach	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	TXT SRA Run Selector	Giulio Pavesi	Apr 23, 2013