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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterArabidopsis thaliana Remove filterTXT
GSE136843
Central clock components modulate plant shade avoidance by directly repressing transcriptional activation activity of PHYTOCHROME-INTERACTING FACTORS
  • Link icon Arabidopsis thaliana
Yu Zhang Sep 01, 2020
GSE16940
An effective approach for identification of in vivo protein–DNA binding sites from paired-end ChIP-Seq data
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
1 dabing zhang Jun 04, 2010
GSE25446
Genome-wide comparison of H3K27me3 difference between ref6-1 and wild type Col
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Falong Lu May 25, 2011
GSE35315
Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Eunkyoo Oh Jul 08, 2012
GSE35952
Global Mapping at the Core of the Arabidopsis Circadian Clock Defines the Network Structure of the Oscillator
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Jose Luis Riechmann Mar 08, 2012
GSE36361
Genome-wide maps of PRR5 binding loci in Arabidopsis thaliana
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Norihito Nakamichi Sep 20, 2012
GSE38401
Nucleosome remodeling by the SWI/SNF complex in non-coding RNA-mediated transcriptional gene silencing (MNase-Seq)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 M Jordan Rowley Dec 01, 2012
GSE39097
Dual Binding of Chromomethylase Domains to H3K9me2-containing Nucleosomes Mediates DNA Methylation in Plants 
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Hume Stroud Nov 11, 2012
GSE43637
Genome-wide ATAF1 binding sites in Arabidopsis thaliana
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Michael Krogh Jensen Jan 01, 2014
GSE48793
APC/CCCS52A2 repressed phytosulfokine signaling restricts root QC cell proliferation through ERF115 degradation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Ken Heyndrickx Nov 04, 2013
GSE60554
Genome-wide identification of MYB3R3-bound genes
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Norihito Nakamichi Jun 01, 2015
GSE106415
Genome-wide identification of SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1)-target genes in Arabidopsis
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Nobuo Ogita Nov 02, 2017
GSE108741
Genome-wide RBR1 (Retinoblastoma related 1) binding sites in Arabidopsis thaliana dividing cells.
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
2 Arp Schnittger Nov 10, 2018
GSE69422
Genome-wide identification of FHY3 binding sites in Arabidopsis floral organ (ChIP-Seq)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
3 Xing Fu Jul 28, 2016
GSE150262
Identification of SHOT1/MTERF18 binding sites on the mitochondrial genome of Arabidopsis thaliana
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
3 Minsoo Kim Aug 09, 2020
GSE154886
Apoplastic lipid barriers regulated by conserved homeobox transcription factors extend seed longevity in multiple plant species
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
3 Eduardo Bueso Mar 31, 2021
GSE185388
ChIP-seq of a transcriptional regulator AtSDR4L
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
3 Liang Song Sep 21, 2022
GSE21821
Relationship between nucleosome positioning and DNA methylation: Bisulfite-Seq, ChIP-Seq, and Mnase-Seq
4 matteo Pellegrini May 29, 2010
GSE24568
A biophysical DNA binding model for the LEAFY transcription factor reveals the evolutionary fluidity of its binding sites
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
4 Felix Ott May 13, 2011
GSE26722
Role of class III HD‐ZIP transcription factors in shade signaling
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Arabidopsis thaliana
4 Stephan Wenkel Jun 01, 2012