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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterOryza sativa
GSE19602
Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids.
  • Link icon Oryza sativa
24 guangming he Jan 20, 2010
GSE19824
Genome-wide evolutionary analysis of eukaryotic DNA methylation
33 Toshiro Nishimura Apr 15, 2010
GSE26610
DNase I hypersensitive sites in two tissues of rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
2 Yufeng Wu Nov 09, 2011
GSE26733
ChIP-seq to identify the positions of three histone modifications in the rice genome
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Yufeng Wu Nov 09, 2011
GSE26734
Genome-wide High Resolution Mapping of Active Regulatory DNA Elements in the Rice Genome
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
5 Yufeng Wu Nov 09, 2011
GSE27048
Genome-wide maps of chromatin state in rice endosperm
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
2 Feng Tan Dec 06, 2011
GSE27064
Rice endosperm: mRNA profiling and H3K27me3 occupancy
  • Link icon Oryza sativa
8 Feng Tan Dec 06, 2011
GSE41183
OsJMJ703, a Histone H3K4 Demethylase, Controls Transposon Activity in Rice
  • Link icon Oryza sativa
4 xiaofeng cao Jan 01, 2013
GSE40054
ChIP-seq analysis of SRT1 and H3K9ac in MH63 and srt1 RNAi.
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
3 zhong xiaochao Feb 10, 2013
GSE50755
The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
6 Tao Zhang Nov 06, 2013
GSE40674
Genome-wide maps of H3K27me3 in WT (wild type) and Epi-df (mutant) rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
2 Liguo Zhang Dec 04, 2013
GSE42201
Chromatin immunoprecipitation of MADS29 to find the cis regulatory regions and targets of this transcription factor
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Sanjay Kapoor Dec 31, 2013
GSE37242
Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine in rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Shuhui Song Apr 15, 2014
GSE53027
Genome-wide nucleosome positioning is orchestrated by genomic regions associated with DNase I hypersensitivity in rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Yufeng Wu May 01, 2014
GSE66537
Global Epigenomic Analysis Indicates that Epialleles Contribute to Allele-specific Expression via Allele-specific Histone Modifications in Hybrid Rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
10 Zhibin Guo Sep 30, 2015
GSE69426
High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns and functions in Arabidopsis and rice
  • Genome binding/occupancy profiling by high throughput sequencing
5 Xuehua Zhong Dec 01, 2015
GSE75794
Nucleosome free chromatin measured by ATAC-seq in Rice leaves (Oryza sativa)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
18 Christoph Hafemeister Jan 01, 2016
GSE72694
miR396-OsGRF6 module controls rice inflorescence architecture
  • Link icon Oryza sativa
4 Wang Kun May 13, 2016
GSE72186
Genome-wide characterization of cis-acting DNA targets of OsNF-YB1 in rice
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Oryza sativa
4 Jingjng Xu Dec 16, 2016
GSE72187
Genome-wide study of OsNF-YB1 regulatory network in rice
  • Link icon Oryza sativa
6 Jingjng Xu Dec 16, 2016