72 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterEscherichia coli
GSE58623
BolA is a transcriptional switch that turns off motility and turns on biofilm development (ChIP-seq)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
2 Cecilia M. Arraiano Feb 19, 2015
GSE77181
RecG Directs DNA Synthesis During Double-Strand Break Repair [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
4 Benura Azeroglu May 19, 2016
GSE77184
RecG Directs DNA Synthesis During Double-Strand Break Repair
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Escherichia coli
27 Benura Azeroglu May 19, 2016
GSE117541
Genomic Analysis of DNA Double-Strand Break Repair in Escherichia coli
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
8 Benura Azeroglu Jan 03, 2019
GSE117952
Genomic Analysis of DNA Double-Strand Break Repair in Escherichia coli (MFA profiles)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Escherichia coli
24 Benura Azeroglu Jan 03, 2019
GSE179963
Distribution of Holliday Junctions and Repair Forks during Escherichia coli DNA Double-Strand Break Repair
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
2 Benura Azeroglu Jul 29, 2021
GSE213028
Transcriptional units form the elementary constraining building blocks of the bacterial chromosome
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
15 Amaury Bignaud Dec 01, 2023
GSE217004
Cas9 off-target binding to the promoter of bacterial genes leads to silencing and toxicity [ChIP-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
9 David Bikard Nov 04, 2022
GSE217006
Cas9 off-target binding to the promoter of bacterial genes leads to silencing and toxicity
  • Link icon Escherichia coli
18 David Bikard Nov 01, 2022
GSE155677
Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler
36 Boyan Bonev Jan 27, 2022
GSE67869
Genome-wide maps of ParBF (SopB) binding along DNA in E. coli
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
2 Jean-Yves Bouet Sep 04, 2015
GSE256357
ParBF DNA binding profiles over various supercoiling level and on linear DNA
  • Genome binding/occupancy profiling by high throughput sequencing
18 Jean-Yves Bouet Jul 01, 2024
GSE69250
Condensin mediates the chromosomal clustering of highly transcribed genes in bacteria
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
6 Long Cai May 29, 2015
GSE267245
RNAP stalling-derived genome instability underlies ribosomal antibiotics efficacy and resistance evolution (ChIP-seq data)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
12 Ruochen Chai May 15, 2024
GSE71249
Quantitative Genomic Analysis of RecA Protein Binding During DNA Double-Strand Break Repair Reveals RecBCD Action in vivo
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
9 Charlotte Anne Cockram Aug 11, 2015
GSE213876
Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
67 Xiaolong Cui Dec 28, 2023
GSE24991
[E-MTAB-332] H-NS and Fis binding to E. coli K12
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
9 European Bioinformatics Institute Feb 05, 2011
GSE15188
Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo
  • Genome binding/occupancy profiling by high throughput sequencing
3 Ghia Euskirchen Jul 15, 2009
GSE142291
Dynamic landscape of protein occupancy across the Escherichia coli chromosome
52 Lydia Freddolino Jun 15, 2021
GSE164796
IPOD-HR, ChIP-seq, RNA-seq of E. coli nucleoid associated protein deletions
148 Lydia Freddolino Oct 01, 2021