16 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterEscherichia coli Remove filterGFF
GSE182079
A chromatin immunoprecipitation database for prokarytic organisms
  • Genome binding/occupancy profiling by high throughput sequencing
102
  • Download icon GFF
Ye Gao Aug 17, 2021
GSE181770
A chromatin immunoprecipitation database for prokarytic organisms [fur]
  • Genome binding/occupancy profiling by high throughput sequencing
14 Ye Gao Aug 15, 2021
GSE162597
CRP(T168P) and AC(S254R) mutant strain of E. coli W
  • Link icon Escherichia coli
14 Sang Woo Seo Aug 23, 2021
GSE66482
Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli
16
  • Download icon GFF
Donghyuk Kim Aug 11, 2015
GSE158683
DeepTFactor, a deep learning-based tool for the identification of transcription factors
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
6 Ye Gao Oct 09, 2020
GSE65712
Genome-wide OxyR and SoxRS transcriptional regulatory networks coordinate complex cellular responses to oxidative stress
  • Link icon Escherichia coli
14
  • Download icon GFF
Donghyuk Kim Aug 13, 2015
GSE65710
Genome-wide OxyR and SoxRS transcriptional regulatory networks coordinate complex cellular responses to oxidative stress [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
6 Donghyuk Kim Aug 13, 2015
GSE162594
Genome-wide maps of CRP(T168P)-binding change in Escherichia coli W
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
5 Sang Woo Seo Aug 23, 2021
GSE189206
Genome-wide promoter assembly mechanisms in E. coli measured at single base resolution
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
50
  • Download icon GFF
B. Franklin Pugh Feb 21, 2022
GSE64849
Integrated analysis of molecular and systems level function of the Crp regulon
  • Link icon Escherichia coli
68
  • Download icon GFF
Haythem Latif Jan 09, 2017
GSE64847
Integrated analysis of molecular and systems level function of the Crp regulon [ChIP-exo]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
43 Haythem Latif Jan 09, 2017
GSE65643
Systems approach elucidates convoluted transcriptional regulation on carbon metabolism
  • Link icon Escherichia coli
24
  • Download icon GFF
Donghyuk Kim Apr 18, 2018
GSE65641
Systems approach elucidates convoluted transcriptional regulation on carbon metabolism [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
12 Donghyuk Kim Apr 18, 2018
GSE223483
The Escherichia coli Fur pan-regulon has few conserved but many unique regulatory targets
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
4
  • Download icon GFF
Ye Gao Aug 04, 2023
GSE150240
The Fur Pan-regulon in E. coli shows diversity in strain-specific sets of target genes
  • Genome binding/occupancy profiling by high throughput sequencing
36 Ye Gao Aug 04, 2023
GSE117186
Topo-Seq application for topoisomerases binding sites identification with a single-nucleotide resolution
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Escherichia coli
31 Dmitry Sutormin Jul 17, 2018