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394 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster		BW
GSE36404	Generation of chromatin maps for ASH1 and FSH applying ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW SRA Run Selector	Tobias Kockmann	Feb 06, 2013
GSE37032	Cell type-specific chromatin profiling of Drosophila neurons [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	16	BW TXT SRA Run Selector	Fred P Davis	Aug 02, 2012
GSE37033	Cell type-specific gene expression and chromatin profiling of Drosophila neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	23	BW	Fred P Davis	Aug 02, 2012
GSE41729	Transcriptional silencing of transposable elements by Piwi and its impact on chromatin and gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	32	BED BW SRA Run Selector	Grzegorz Sienski	Nov 26, 2012
GSE48317	Drosophila Gtsf1 is an essential component of the Piwi mediated transcriptional silencing complex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	7	BW CSV SRA Run Selector	Grzegorz Sienski	Sep 06, 2013
GSE49899	Diverse patterns of genome-wide DNA targeting by transcriptional regulators in Drosophila melanogaster	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	47	BED BW SRA Run Selector	Kevin P. White	Aug 16, 2013
GSE53719	Tau promotes neurodegeneration through global chromatin relaxation	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BW SRA Run Selector	Bess Frost	Dec 31, 2013
GSE55257	H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex.	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	82	BW SRA Run Selector	Ruslan Sadreyev	Aug 14, 2014
GSE55306	ChIP-nexus: a novel ChIP-exo protocol for improved detection of in vivo transcription factor binding footprints	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	18	BW SRA Run Selector	Julia Zeitlinger	Dec 02, 2014
GSE58821	High-Affinity Sites Form an Interaction Network to Facilitate Spreading of the MSL Complex across the X Chromosome in Drosophila	Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	100	BED BIGWIG BW TXT SRA Run Selector	Fidel Ramirez	Oct 01, 2015
GSE59078	Discovery of Transcription Factors and Regulatory Regions Driving In Vivo Tumor Development by ATAC-seq and FAIRE-seq Open Chromatin Profiling	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	13	BED BW TXT SRA Run Selector	Kristofer Davie	Feb 13, 2015
GSE59610	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	24	BW TXT WIG	Adrien Le Thomas	Jul 26, 2014
GSE59706	Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila virilis	4	BW TXT SRA Run Selector	Stein Aerts	Jun 17, 2015
GSE59924	A Novel Role of Polycomb in Positive Transcription Regulation by Modulating H4K20me1	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	4	BED BW TXT SRA Run Selector	Gang Wei	Apr 12, 2016
GSE60686	Genome wide analysis of binding of Polyhomeotic and polymerization defective Polyhomeotic in Drosophila S2 cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	10	BW TXT SRA Run Selector	Nicole Francis	Mar 08, 2016
GSE61340	ChIP-seq of MSL1 in male and female fly samples	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila virilis	10	BW SRA Run Selector	Friederike Dündar	Apr 25, 2016
GSE62557	Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	2	BW SRA Run Selector	Delphine Potier	Dec 01, 2014
GSE65250	Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila [FAIRE-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	3	BW SRA Run Selector	Delphine Potier	Aug 31, 2017
GSE65252	Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BW TXT	Delphine Potier	Aug 31, 2017
GSE65441	Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	32	BW TXT SRA Run Selector	Christine Rushlow	Aug 21, 2015