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20362 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens
GSE33838	DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BAI BAM BEDGRAPH CSV SRA Run Selector	Stephen Tapscott	Jan 03, 2012
GSE65191	Nucleosome locations in human oral keratinocytes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BAI BAM SRA Run Selector	Guy Lyons	Dec 31, 2017
GSE103693	The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAI BAM XLSX SRA Run Selector	Kevin J Sokoloski	Jan 02, 2018
GSE212109	Epigenetic regulation of profibrotic macrophages in systemic sclerosis- associated interstitial lung disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BAI BED CSV H5 TBI TSV	Tracy Tabib	Sep 02, 2022
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE21823	Nucleosome map of the IMR90 fibroblast cell line	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BAM SRA Run Selector	Benjamin Berman	Apr 01, 2011
GSE24632	ZNF274 colocalizes with the histone methyltransferase SETDB1 at ZNF 3' ends.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BAM BED BEDGRAPH BIGWIG TAGALIGN SRA Run Selector	Philip Cayting	Nov 15, 2010
GSE24685	Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BAM BED BIGWIG TAGALIGN SRA Run Selector	Philip Cayting	Nov 15, 2010
GSE26328	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BAM BIGWIG BROADPEAK NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Dec 29, 2010
GSE27030	Genome-wide binding profiles of the B-Myb-MuvB complex in HeLa cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM PDF SRA Run Selector	Subhashini Sadasivam	Jan 25, 2012
GSE27031	The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BAM CEL	Subhashini Sadasivam	Jan 25, 2012
GSE27929	Functional analysis of Kap1 genomic recruitment	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BAM SRA Run Selector	Philip Cayting	May 24, 2011
GSE28162	L3MBTL2 protein acts in concert with PcG protein mediated monoubiquitination of H2A to establish a repressive chromatin structure [ChIP-Seq data].	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BAM BIGWIG TXT SRA Run Selector	Philip Cayting	Jun 07, 2011
GSE28286	Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BAM SRA Run Selector	Philip Cayting	Apr 04, 2011
GSE28867	ENCODE Genome Institute of Singapore DNA Paired-End Ditags	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BAM SRA Run Selector	ENCODE DCC	Apr 27, 2011
GSE29069	Global DNA Hypomethylation Coupled to Repressive Chromatin Domain Formation and Gene Silencing in Breast Cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	14	BAM	Gary Chung Hon	Sep 16, 2011
GSE29118	Genome-wide location analysis in breast cancer cells (HCC1954)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BAM SRA Run Selector	Gary Chung Hon	Sep 16, 2011