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46 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BAM
GSE244725	Harnessing HetHydrogel: An Approach to Single-Cell Multi-Omics	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	5	BAM TXT	Guoqiang Zhou	Oct 10, 2023
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE33722	Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BAM BED TXT	Wei Xie	Feb 15, 2012
GSE33838	DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BAI BAM BEDGRAPH CSV SRA Run Selector	Stephen Tapscott	Jan 03, 2012
GSE103693	The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAI BAM XLSX SRA Run Selector	Kevin J Sokoloski	Jan 02, 2018
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE27030	Genome-wide binding profiles of the B-Myb-MuvB complex in HeLa cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM PDF SRA Run Selector	Subhashini Sadasivam	Jan 25, 2012
GSE27031	The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BAM CEL	Subhashini Sadasivam	Jan 25, 2012
GSE30401	AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM NARROWPEAK TAGALIGN	Joel Rozowsky	Jul 09, 2011
GSE30558	Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	2	BAM BED CSV WIG SRA Run Selector	Mark Robinson	Jan 18, 2012
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE33632	Genome-wide analysis of histone eviction by FAIRE-Seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	BAM BED SRA Run Selector	Baoxu Pang	Jun 04, 2013
GSE33633	Epigenetic changes due to histone eviction induced by anthracycline doxorubicin and aclarubicin	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BAM BED TXT SRA Run Selector	Baoxu Pang	Jun 04, 2013
GSE33634	Topoisomerase II inhibitors and histone eviction	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	62	BAM BED	Baoxu Pang	Jun 04, 2013
GSE32673	E2F7 represses a transcriptional network of oscillating cell cycle genes to control S-phase progression.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BAM COD SRA Run Selector	Michal Mokry	Jan 04, 2012
GSE65191	Nucleosome locations in human oral keratinocytes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BAI BAM SRA Run Selector	Guy Lyons	Dec 31, 2017
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE101426	3D genome landscape of Epstein-Barr Virus oncoproteins and virus activated NF-kB in lymphoblastoid cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BAM TDF SRA Run Selector	Sizun Jiang	Sep 01, 2017
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE29069	Global DNA Hypomethylation Coupled to Repressive Chromatin Domain Formation and Gene Silencing in Breast Cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	14	BAM	Gary Chung Hon	Sep 16, 2011