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9938 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BED
GSE12616	Genome-wide Analysis of Histone Methylations in Memory CD8+ T Cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED GRAPH SRA Run Selector	Chongzhi Zang	Jun 12, 2009
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE13008	Genome-wide mapping of RNA Polymerase II binding sites	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Flora Vaccarino	Oct 02, 2008
GSE13308	Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED TXT SRA Run Selector	Chongzhi Zang	Jul 26, 2009
GSE13518	Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED TXT SRA Run Selector	Leighton James Core	Dec 04, 2008
GSE14664	ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TXT SRA Run Selector	H.G. Stunnenberg	Mar 09, 2009
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE16657	Chromatin Poises miRNA- and Protein-coding Genes for Expression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED SRA Run Selector	Keji Zhao	Aug 10, 2009
GSE17001	High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Emily Hodges	Jul 08, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE17352	HeLa input control in high salt condition	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BED TXT	Chongzhi Zang	Nov 01, 2024
GSE17611	Genome-wide profiling of p63 binding sites identifies genes and regulatory elements for p63-related disorders	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED TXT SRA Run Selector	Jo Huiqing Zhou	Aug 15, 2010
GSE17616	A map of open chromatin in human pancreatic islets	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Homo sapiens	5	BED PAIR WIG SRA Run Selector	Kyle Jeffrie Gaulton	Jan 31, 2010
GSE17917	Distinct epigenomic landscapes of pluripotent and lineage-committed human cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	Bing Ren	Oct 13, 2009
GSE18292	Chromatin States in Human ES Cells Reveal Key Regulatory Sequences and Genes Involved in Pluripotency and Self-renewal	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED TXT SRA Run Selector	Bing Ren	Oct 14, 2009
GSE18481	Double fragmentation ChIP-seq provides single nucleotide resolution Tcf4 binding characteristics	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED SRA Run Selector	Michal Mokry	Nov 01, 2010