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6545 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BIGBED
GSE140983	Massively Parallel Reporter Assay of human-specific substitutions in neurodevelopmental enhancers	Other Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Homo sapiens	18	BIGBED BW TSV TXT SRA Run Selector	James Patrick Noonan	Nov 26, 2019
GSE79686	Loss of CREBBP results in H3K27Ac loss at enhancers and gene expression repression in lymphoma cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	57	BIGBED BW	Huimin Geng	Oct 13, 2016
GSE133379	Detection of genomic G-quadruplexes in living cells using a small artificial protein	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens Gallus gallus	18	BIGBED BIGWIG NARROWPEAK SRA Run Selector	Zheng Tan	Oct 13, 2020
GSE42075	RUNX1 is a key target gene in t(4;11) leukemias and contributes to gene activation by interacting with the AF4-MLL complex	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BIGBED BIGWIG SRA Run Selector	Erica Ballabio	Jan 31, 2013
GSE52146	High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BIGBED SRA Run Selector	Samir Parekh	Aug 07, 2014
GSE52149	High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BIGBED	Samir Parekh	Aug 07, 2014
GSE59538	Self-enforcing Feedback Activation between BCL6 and Pre-B Cell Receptor Signaling Defines a Distinct Subtype of Acute Lymphoblastic Leukemia	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BIGBED BIGWIG SRA Run Selector	Huimin Geng	Feb 08, 2015
GSE59541	BCL6 represents a therapeutic target in E2A-PBX1 and MLL-rearranged acute lymphoblastic leukemia	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BIGBED BIGWIG SRA Run Selector	Huimin Geng	Dec 31, 2019
GSE61475	Transcription factor binding dynamics during human ES cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	204	BIGBED BW TXT SRA Run Selector	Alexander Tsankov	Feb 19, 2015
GSE63057	7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BIGBED BIGWIG SRA Run Selector	Giuseppe Testa	Dec 15, 2014
GSE63058	7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by SNP array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	139	BIGBED BIGWIG CEL CYCHP	Giuseppe Testa	Dec 15, 2014
GSE73212	Promoter H3K4 methylation dynamically reinforces activation-induced pathways in human CD4 T cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	127	BIGBED BW GFF SRA Run Selector	Ryan Conrad Thompson	Jun 01, 2016
GSE79639	Loss of CREBBP results in H3K27ac loss at enhancers in lymphoma cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BIGBED BW SRA Run Selector	Huimin Geng	Oct 13, 2016
GSE84199	Benzotriazoles reactivate latent HIV-1 through inactivation of STAT5 SUMOylation (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BIGBED BW SRA Run Selector	David Price	Jan 11, 2017
GSE84203	Benzotriazoles reactivate latent HIV-1 through inactivation of STAT5 SUMOylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BIGBED BW	David Price	Jan 11, 2017
GSE86670	ChIP-seq from SK-N-SH (ENCSR000FCS)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG TXT	ENCODE DCC	Oct 14, 2016
GSE86675	ChIP-seq from OCI-LY7 (ENCSR005SXO)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG TXT	ENCODE DCC	Oct 14, 2016
GSE86676	ChIP-seq from fibroblast of arm (ENCSR007YOT)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG TXT	ENCODE DCC	Oct 14, 2016
GSE86677	DNase-seq from Karpas-422 (ENCSR019JDO)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG TXT	ENCODE DCC	Oct 14, 2016
GSE86678	ChIP-seq from DOHH2 (ENCSR052WRV)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG TXT	ENCODE DCC	Oct 14, 2016