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536 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		CSV
GSE33838	DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BAI BAM BEDGRAPH CSV SRA Run Selector	Stephen Tapscott	Jan 03, 2012
GSE212109	Epigenetic regulation of profibrotic macrophages in systemic sclerosis- associated interstitial lung disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BAI BED CSV H5 TBI TSV	Tracy Tabib	Sep 02, 2022
GSE30558	Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	2	BAM BED CSV WIG SRA Run Selector	Mark Robinson	Jan 18, 2012
GSE112479	The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	100	BB BED BW CSV TXT	Bruno Di Stefano	Oct 03, 2019
GSE159411	Transcription Factor Protein Interactomes Reveal Genetic Determinants in Heart Disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	95	BB BED BW CSV H5 TXT SRA Run Selector	Deepak Srivastava	Feb 18, 2022
GSE34403	Bisulphite-sequencing of chromatin immunoprecipitated DNA directly informs methylation status of histone-modified DNA	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	8	BED CSV WIG	Mark Robinson	Jan 18, 2012
GSE41166	A dynamic H3K27ac signature defines VEGF-regulated endothelial enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	32	BED CSV TXT SRA Run Selector	Peter J Park	Mar 31, 2013
GSE43988	The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	9	BED CSV RPKM	Dimple Chakravarty	Dec 01, 2014
GSE54334	EDD: a program for detection of wide genomic enrichment domains robust against local variations	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	BED CSV	Philippe Collas	Apr 25, 2014
GSE56307	Histone chaperone HIRA orchestrates H4K16ac-decorated dynamic chromatin in senescent cells and is required for suppression of oncogene-induced neoplasia.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG CSV SRA Run Selector	Peter Adams	Nov 26, 2014
GSE58310	Epigenetic programming during monocyte to macrophage differentiation and trained innate immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	64	BED CSV WIG SRA Run Selector	Hindrik Kerstens	Sep 26, 2014
GSE63346	Pre-patterning of differentiation-driven nuclear lamin A/C-associated chromatin domains by GlcNAcylated histone H2B	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BED BW CSV SRA Run Selector	Philippe Collas	Sep 04, 2015
GSE69566	Combinatorial Regulation Mediated by Biochemically Distinct Forms of SWI/SNF [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BED BW CSV SRA Run Selector	Jesse Raab	Nov 30, 2015
GSE72696	Integrative fine-mapping of regulatory variants and mechanisms at coronary artery disease loci	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	24	BED CSV TXT SRA Run Selector	Thomas Quertermous	Jul 06, 2016
GSE74308	Antisense transcription predicts a distinct chromatin environment at mammalian promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	7	BED BW CSV XLSX SRA Run Selector	Christopher Lavender	Feb 11, 2017
GSE74426	Obesity and Bariatric Surgery Drive Epigenetic Variation of Spermatozoa in Humans	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	77	BED CSV XLS SRA Run Selector	Lars Roed Ingerslev	Dec 04, 2015
GSE74716	SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	12	BED BEDGRAPH CSV TSV SRA Run Selector	Rasim Barutcu	Jun 02, 2016
GSE78158	DUX4 recruits p300/CBP through its C-terminus and induces global H3K27 acetylation changes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BED BIGWIG CSV SRA Run Selector	Micah Gearhart	Mar 10, 2016
GSE80358	PR isoform-specific ER and PR chromatin binding and gene expression observed in-vitro in breast cancer cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	50	BED CSV SRA Run Selector	Hari Singhal	Dec 31, 2017
GSE81255	Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED BROADPEAK BW CSV SRA Run Selector	William Greenleaf	May 10, 2016