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26 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		GTF
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE38101	USP49 deubiquitinates histone H2B and regulates pre-mRNA splicing	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	10	BEDGRAPH GTF	Hengbin Wang	Jul 28, 2013
GSE43789	Physiological Vascular Permeability Requires Induction of Endothelial NR4A1 by Progesterone Receptor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BW GTF XLSX	Lauren Goddard	Jan 01, 2014
GSE46130	Transcriptional and Epigenetic Dynamics During Specification of Human Embryonic Stem Cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	10	BED GTF SRA Run Selector	Michael Johannes Ziller	May 01, 2013
GSE46503	Selective suppression of endothelial cytokine production by progesterone receptor	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	14	BW GTF XLSX	Lauren Goddard	Jan 01, 2014
GSE56144	Site-Specific Association with Host and Viral Chromatin by KSHV LANA and its Reversal during Lytic Reactivation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	33	BED GTF TXT SRA Run Selector	ALEXANDRE MERCIER	Apr 01, 2014
GSE62486	T-bet recruits P-TEFb to super-enhancers to regulate T helper cell differentiation	Expression profiling by high throughput sequencing Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BED GTF TXT	Richard Jenner	Jun 08, 2016
GSE63782	Transcriptional plasticity promotes primary and acquired resistance to BET bromodomain inhibition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	103	BED BW GTF TSV SRA Run Selector	Philipp Rathert	Sep 08, 2015
GSE64332	Human DIS3 shapes the RNA polymerase II transcriptome degrading variety of unwanted transcripts.	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BEDGRAPH GTF TSV SRA Run Selector	Andrzej Dziembowski	Aug 20, 2015
GSE75792	TT-Seq captures the human transient transcriptome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	12	GTF TXT SRA Run Selector	Björn Schwalb	Jun 03, 2016
GSE106851	Landscape of H3K4me3 in human CD19 cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	24	BED GTF SRA Run Selector	Amy Leung	Oct 04, 2018
GSE111683	ZBTB24 is a transcriptional regulator that coordinates with DNMT3B to control DNA methylation [ChiP-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BED GTF TXT SRA Run Selector	Keith D Robertson	Aug 01, 2018
GSE111689	ZBTB24 is a transcriptional regulator that coordinates with DNMT3B to control DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	33	BED GTF IDAT	Keith D Robertson	Jul 31, 2018
GSE112963	Endogenous interaction profiling identifies DDX5 as an oncogenic coactivator of transcription factor Fra-1	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	13	GTF TXT	Karin Dahlman-Wright	Sep 03, 2019
GSE117888	Role of GR in protection of podocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	16	BEDGRAPH BROADPEAK GTF HIC NARROWPEAK SRA Run Selector	Jingping Yang	May 23, 2021
GSE130826	Effect of Cell Division on Cell Differentiation (ChIP-Seq HUvsNoc)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BW GTF SRA Run Selector	Rodrigo Andres Grandy	May 31, 2021
GSE147646	The transcriptome, histone modification and chromatin organization of kidney tubule cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	11	BED BW GTF HIC SRA Run Selector	Jingping Yang	Feb 02, 2021
GSE148433	Efficient RNA polymerase II pause release requires U2 snRNP function	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BW GTF SRA Run Selector	Sara Patricia Monteiro Martins	Jan 31, 2021
GSE160396	Identification of causal genes about osteoporosis associated with risk loci using DLO Hi-C	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	15	BEDGRAPH BW GTF	LI LI	Feb 08, 2023
GSE175681	The transcriptome and genome-wide mapping of Hif1α binding sites in kidney tubule cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	4	BED BW GTF SRA Run Selector	Aiping Duan	May 28, 2021