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232 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		HIC
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE103477	Transcription elongation regulates genome 3D structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	253	BED BEDGRAPH HIC TXT SRA Run Selector	Christopher Benner	Aug 23, 2018
GSE104579	DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	18	BED BW HIC	Jianzhong Su	Nov 24, 2017
GSE105028	Architectural proteins and pluripotency factors cooperate to orchestrate the transcriptional response of hESCs to temperature stress	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	93	BED BW HIC SRA Run Selector	XIAOWEN LYU	Aug 03, 2018
GSE107447	Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	100	BED BW CSV HIC TXT	Yotam Drier	Oct 16, 2019
GSE109924	TAD cliques shape the 4-dimensional genome during dual lineage terminal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	34	BED BW FPKM_TRACKING HIC SRA Run Selector	Philippe Collas	Feb 23, 2019
GSE116876	Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	87	BED BW HIC TXT	YEQIAO ZHOU	Feb 27, 2019
GSE120771	Selective Disruption of Core Regulatory Transcription	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	109	BED HIC TXT	Xinyu Wen	May 31, 2019
GSE128952	A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	32	BED BEDGRAPH HIC NARROWPEAK TXT SRA Run Selector	Sizun Jiang	Dec 22, 2022
GSE131651	NSD2 overexpression links drives clustered chromatin and transcriptional changes in a subset of insulated domains of insulated domains	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Priscillia Lhoumaud	Sep 03, 2019
GSE137661	Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (ChIA-PET)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BED BEDPE HIC TXT SRA Run Selector	Yijun Ruan	Dec 05, 2019
GSE137662	Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	30	BED BEDPE HIC TXT	Yijun Ruan	Dec 05, 2019
GSE141752	Quantitative trait loci mapped for TCF21 binding, chromatin accessibility and chromosomal looping in coronary artery smooth muscle cells reveal molecular mechanisms of coronary disease loci	Genome binding/occupancy profiling by high throughput sequencing Other SNP genotyping by SNP array Genome variation profiling by SNP array	Homo sapiens	18	BED BEDPE HIC TXT	Thomas Quertermous	May 07, 2020
GSE143937	The Myc-Associated Zinc Finger Protein (MAZ) Works Both Independently and Together with CTCF to Control Cohesin Positioning and Genome Organization	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	24	BED HIC TXT SRA Run Selector	Tiaojiang XIao	Jan 01, 2021
GSE145774	Multi-omics HUVEC data of Tibetan and Han in hypoxic induction.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	108	BED FPKM_TRACKING HIC SRA Run Selector	Jingxue Xin	Jul 15, 2020
GSE146469	ZFP36L2 post-transcriptionally controls acute myeloid leukemia differentiation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	27	BED BW HIC NARROWPEAK	Hua Zhou	Jan 19, 2021
GSE147646	The transcriptome, histone modification and chromatin organization of kidney tubule cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	11	BED BW GTF HIC SRA Run Selector	Jingping Yang	Feb 02, 2021
GSE151193	Chromatin looping links target genes with genetic risk loci for dermatological traits	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	17	BED BEDGRAPH CSV HIC SRA Run Selector	chenfu shi	May 27, 2020
GSE158288	Phase separation of Epstein-Barr virus EBNA2 reorganizes chromatin topology for epigenetic regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	25	BED BROADPEAK BW HIC TXT SRA Run Selector	Hao bingtao	Sep 22, 2020