GEO Browser - GEO

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6165 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		SRA Run Selector
GSE11892	A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Marc Sultan	Jul 03, 2008
GSE12616	Genome-wide Analysis of Histone Methylations in Memory CD8+ T Cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED GRAPH SRA Run Selector	Chongzhi Zang	Jun 12, 2009
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE12781	PolII transcription factor in Human HeLa S3	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Flora Vaccarino	Sep 16, 2008
GSE12782	STAT1 transcription factor in Human HeLa S3	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Flora Vaccarino	Sep 16, 2008
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE13008	Genome-wide mapping of RNA Polymerase II binding sites	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Flora Vaccarino	Oct 02, 2008
GSE13084	Mapping polycomb complexes in human and mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT SRA Run Selector	Tarjei S Mikkelsen	Nov 01, 2008
GSE13308	Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED TXT SRA Run Selector	Chongzhi Zang	Jul 26, 2009
GSE13518	Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED TXT SRA Run Selector	Leighton James Core	Dec 04, 2008
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE14022	Mapping Novel Chromatin Regions Using Sono-Seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Raymond K Auerbach	Dec 18, 2008
GSE14092	An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (II)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	TXT SRA Run Selector	Jindan Yu	May 18, 2010
GSE14283	A general mechanism for transcription regulation by Oct1 and Oct4 in response to genotoxic and oxidative stress	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Dean Tantin	Jan 22, 2009
GSE14664	ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TXT SRA Run Selector	H.G. Stunnenberg	Mar 09, 2009
GSE15353	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	TXT WIG SRA Run Selector	Eric Chuah	Mar 23, 2009
GSE15690	Distinctive Chromatin in Human Sperm Packages Genes that Guide Embryo Development: ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	TXT SRA Run Selector	Bradley R. Cairns	Jun 15, 2009
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009