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91 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TAB
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE21202	CpG islands recruit a histone H3 lysine 36 demethylase	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	TAB TXT	Peter J Park	Apr 27, 2010
GSE38284	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	TAB TXT SRA Run Selector	Peter J Park	Jul 16, 2012
GSE38771	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	13	BEDGRAPH CALLS PAIR TAB	Peter J Park	Jul 16, 2012
GSE51428	Transcriptomic profiling reveals new aspects of progestin signaling in breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TAB TXT SRA Run Selector	Angeliki Magklara	Jun 05, 2014
GSE53215	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target [Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED TAB SRA Run Selector	Prasoon Agarwal	Dec 31, 2015
GSE62063	B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BED BW TAB WIG SRA Run Selector	Marei Dose	Dec 04, 2014
GSE69253	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED CEL TAB	Prasoon Agarwal	Dec 31, 2015
GSE69539	Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells [ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	TAB SRA Run Selector	Francesco J DeMayo	Jun 05, 2015
GSE69542	FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization [ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	TAB SRA Run Selector	Francesco J DeMayo	Jun 05, 2015
GSE76038	The ultra-sensitive Nodewalk technique identifies stochastic from virtual, population-based enhancer hubs regulating MYC in 3D: Implications for the fitness of cancer cells [Nodewalk-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	88	TAB TXT SRA Run Selector	Rolf Ohlsson	Sep 30, 2019
GSE76049	The ultra-sensitive Nodewalk technique identifies stochastic from virtual, population-based enhancer hubs regulating MYC in 3D: Implications for the fitness of cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	98	BED TAB TXT	Rolf Ohlsson	Sep 30, 2019
GSE79873	Unique long non-coding RNA expression signature in ETV6/RUNX1-driven B-cell precursor acute lymphoblastic leukemia	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	103	TAB TXT	Farzaneh Ghazavi	Sep 26, 2016
GSE94037	FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	TAB	Franco Demayo	Jan 25, 2017
GSE94038	Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	TAB	Franco Demayo	Jan 25, 2017
GSE98483	p63 controls the enhancer landscape during keratinocyte differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED TAB SRA Run Selector	Jo Huiqing Zhou	Dec 18, 2018
GSE102237	Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED TAB SRA Run Selector	Vladimir B Teif	Aug 11, 2017
GSE106258	BRD4 promotes DNA repair and mediates the formation of TMPRSS2-ERG gene rearrangements in prostate cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BIGWIG TAB SRA Run Selector	Ram Mani	Jan 04, 2018
GSE109440	Extensive epigenomic integration of the glucocorticoid response in primary human monocytes and in vitro derived macrophages	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	72	BEDGRAPH BW TAB TXT	Cheng Wang	Mar 03, 2019