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1684 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by array
GSE38216	Dynamic changes of DNA methylome and hydroxymethylome during neural differentiation of hES cells (Methylation BeadChip)	Methylation profiling by array	Homo sapiens	12	BED TXT	Mirang Kim	Nov 04, 2013
GSE38217	Dynamic changes of DNA methylome and hydroxymethylome during neural differentiation of hES cells	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	6	BED	Mirang Kim	Nov 04, 2013
GSE38548	Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array Methylation profiling by genome tiling array	Homo sapiens	106	BED BW CEL FPKM_TRACKING PROBSCOREISLAND TXT	Kornelia Polyak	Jun 09, 2015
GSE40700	CpG Methylation by Illumina Methyl27 Bead Arrays from ENCODE/HAIB	Methylation profiling by array	Homo sapiens	63	BED BED9	ENCODE DCC	Sep 07, 2012
GSE43298	Genome-scale methylome profiling of human pheochromocytomas and paragangliomas (Illumina methylation beadchips) and mouse chromaffin cells (RRBS)	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	176	BED	Eric Letouzé	May 06, 2013
GSE47592	5-hydroxymethylcytosine marks promoters in colon that resist hypermethylation in cancer	Expression profiling by array Methylation profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	137	BED	Chandra Chilamakuri	Feb 03, 2015
GSE57361	Genome-scale profiling of the DNA methylation landscape in human neurological disorders	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	33	BED	Manel Esteller	Jan 22, 2016
GSE61343	Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics	Expression profiling by high throughput sequencing Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Pan troglodytes	65	BED	Irene Gallego Romero	Sep 11, 2014
GSE66708	NALP3 inflammasome up-regulation and CASP1 cleavage of the glucocorticoid receptor causes glucocorticoid resistance in leukemia cells	Expression profiling by array Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1144	BED CEL TSV	Steven William Paugh	Mar 24, 2015
GSE89474	DNA methylation patterns in twins discordant for ALS reveal concordant signatures of disease	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	20	BED IDAT	Paul E Young	Jan 15, 2017
GSE92469	Characterizing the epigenome of glioma stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	157	BED BW FPKM_TRACKING IDAT TXT	Dan Zhou	Feb 23, 2018
GSE111689	ZBTB24 is a transcriptional regulator that coordinates with DNMT3B to control DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	33	BED GTF IDAT	Keith D Robertson	Jul 31, 2018
GSE155707	HDAC inhibition suppresses telomerase activity in neuroblastoma cells harboring TERT rearrangements	Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BED IDAT	January 3rd Weiner	Aug 04, 2022
GSE163331	GATA6 is predicted to regulate DNA methylation in an in vitro model of human hepatocyte differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by array	Homo sapiens	68	BED IDAT	Takahiro Suzuki	May 04, 2022
GSE171074	The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Other Methylation profiling by high throughput sequencing	Homo sapiens	88	BED BW HIC IDAT NARROWPEAK TXT	Joanna Achinger-Kawecka	Dec 12, 2021
GSE253202	Altered DNA methylation underlies monocyte dysregulation and immune exhaustion memory in sepsis	Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	75	BED BW IDAT	Blake Alexander Caldwell	Mar 05, 2024
GSE35856	Maternal Influence on Exonic CpG Island Methylation in the Developing Hippocampus	Expression profiling by high throughput sequencing Methylation profiling by array Methylation profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH PAIR WIG	Miklos Toth	Feb 04, 2013
GSE74519	Trans-effects of chromosome aneuploidies on DNA methylation patterns in human Down syndrome and mouse models	Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	134	BEDGRAPH BW	Benjamin Tycko	Oct 30, 2015
GSE109399	Epigenetic characterization of glioblastoma stem cells	Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	70	BEDGRAPH IDAT NARROWPEAK	Paul Guilhamon	Nov 14, 2019
GSE119776	CHROMATIN LANDSCAPES REVEAL DEVELOPMENTALLY ENCODED TRANSCRIPTIONAL STATES THAT DEFINE GLIOBLASTOMA	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Expression profiling by high throughput sequencing	Homo sapiens	384	BEDGRAPH IDAT	Stephen Mack Christopher	Mar 18, 2019