GEO Browser - GEO

Series

Samples

Platforms

DataSets

33 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by genome tiling array			BED
GSE87424	Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	167	XLSX TXT IDAT CSV BED	Gary L Johnson	Jan 20, 2017
GSE194050	Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	XLSX BED	Xiaofei Gao	Jan 23, 2022
GSE14603	Gene Body Hypermethylation of ATM in Peripheral Blood DNA of Bilateral Breast Cancer Patients	Methylation profiling by genome tiling array	Homo sapiens	14	WIG PAIR GFF BED	James Flanagan	Jan 29, 2009
GSE34403	Bisulphite-sequencing of chromatin immunoprecipitated DNA directly informs methylation status of histone-modified DNA	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	8	WIG CSV BED	Mark Robinson	Jan 18, 2012
GSE24090	Genome-wide methylation analysis in HPV(-) and HPV(+) squamous cell carcinoma cell lines	Methylation profiling by genome tiling array	Homo sapiens	28	TXT CEL BED	Jung Kim	Dec 01, 2010
GSE38548	Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array Methylation profiling by genome tiling array	Homo sapiens	106	TXT PROBSCOREISLAND FPKM_TRACKING CEL BW BED	Kornelia Polyak	Jun 09, 2015
GSE46073	Gene expression and genome-wide location analysis of breast cancer cell-lines	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	41	TXT BED	Kornelia Polyak	Jun 17, 2014
GSE54843	Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	56	TXT CEL BIGWIG BED	Keith D Robertson	Oct 20, 2014
GSE85467	Epigenomic Profiling of Primary Gastric Adenocarcinoma Reveals Super-enhancer Heterogeneity	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by SNP array	Homo sapiens	259	TXT IDAT CEL BEDGRAPH BED	Aditi Qamra	Sep 28, 2016
GSE101864	Chronic Cigarette Smoke-Induced Epigenomic, gene expression and chromatin changes in Bronchial Epithelial Cells	Methylation profiling by genome tiling array Expression profiling by array Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	86	TXT PDF IDAT BED	Hariharan Easwaran	Oct 21, 2017
GSE120558	Gain of function DNMT3A mutations cause microcephalic dwarfism and hypermethylation of Polycomb-regulated regions	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	66	TXT IDAT COV BIGWIG BED	Duncan Sproul	Nov 26, 2018
GSE147004	DNA Methylation Study of Huntington's Disease and Motor Progression in Three Species	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Ovis aries Rattus norvegicus	348	TXT IDAT BED	Steve Horvath	Jul 02, 2020
GSE139388	DNA methylation and gene expression changes during acquired resistance to ALK inhibitors	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	7	TSV MTX IDAT BED	Jong Hwan Kim	Sep 20, 2022
GSE168186	Hepatitis C virus scarring of the epigenome and creates targetable vulnerabilities following viral clearance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	83	SF IDAT BED	Keith D Robertson	Sep 23, 2021
GSE34941	Integrative Epigenomic Analysis Identifies Biomarkers and Therapeutic Targets in Adult B-Acute Lymphoblastic Leukemia	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	428	PAIR BIGWIG BED	Huimin Geng	Nov 27, 2012
GSE94368	Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens	19	IDAT BW BED	Ksenia Skvortsova	Mar 17, 2017
GSE15220	Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	13	CHP CEL BED BAR	Hoi Hung Cheung	Mar 18, 2009
GSE14620	Ontoepigenetic profile of mouse liver reveals dynamic regulation of chromatin during development	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	13	CEL BED BAR	Steven Hart	Jan 29, 2009
GSE15014	Comprehensive DNA methylation analysis of neuronal and non-neuronal nuclei in the human brain	Methylation profiling by genome tiling array	Homo sapiens	6	CEL BED BAR	Kazuya Iwamoto	Feb 21, 2011
GSE22077	MeDIP-on-chip and Pol-II ChIP-on-chip during C2C12 myogenic and BMP2-induced osteogenic differentiation	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	14	CEL BED BAR	Marlinda Hupkes	Feb 07, 2011