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216 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by genome tiling array			CEL
GSE9637	X-inactivation in hESCs	SNP genotyping by SNP array Methylation profiling by genome tiling array Expression profiling by genome tiling array	Homo sapiens	9	CEL CHP TXT	Yin Shen	Feb 19, 2008
GSE15619	Epigenetic signature of breast cancer and its association with gene expression and copy number	SNP genotyping by SNP array Methylation profiling by genome tiling array Genome variation profiling by SNP array Expression profiling by array	Homo sapiens	16	CEL CHP	Ann Chambers	Jul 03, 2009
GSE47651	Generation and Characterization of an immortalized human mesenchymal stromal cell line model	SNP genotyping by SNP array Methylation profiling by genome tiling array Genome variation profiling by SNP array Expression profiling by array	Homo sapiens	20	CEL CHP TXT	Leonardo A. Meza-Zepeda	Dec 31, 2014
GSE49280	Integrated genomic analyses of adrenocortical tumors (SNP array, DNA methylation, mRNA and miRNA expression).	SNP genotyping by SNP array Non-coding RNA profiling by high throughput sequencing Methylation profiling by genome tiling array Genome binding/occupancy profiling by array Expression profiling by array	Homo sapiens	324	CEL	Nabila Elarouci	Apr 07, 2014
GSE71525	A comprehensively characterized cell line panel highly representative of clinical ovarian high-grade serous carcinomas	SNP genotyping by SNP array Methylation profiling by genome tiling array Genome variation profiling by SNP array Expression profiling by array	Homo sapiens	93	CEL IDAT	Kelsie L Thu	Aug 11, 2016
GSE86260	Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype	SNP genotyping by SNP array Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array Genome variation profiling by SNP array Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens	52	CEL IDAT	Ruth Pidsley	Mar 26, 2018
GSE49044	DNA unmethylome profiling by covalent capture of CpG sites (microarray)	Other Methylation profiling by genome tiling array	Homo sapiens	90	BED BEDGRAPH CEL	Viviane Labrie	Aug 27, 2013
GSE69972	Chromosome-wide DNA unmethylome profiling examining human chromosomes 2, 9, 19 and mouse chromosomes 1, 9, 19	Other Methylation profiling by genome tiling array	Homo sapiens Mus musculus	170	CEL TXT	Arturas Petronis	Mar 25, 2016
GSE69979	Epigenetics of lactose intolerance and lactase persistence	Other Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	557	CEL TXT	Arturas Petronis	Mar 25, 2016
GSE77276	The molecular landscape of hepatocellular carcinoma with portal vein tumor thrombosis	Non-coding RNA profiling by high throughput sequencing Methylation profiling by genome tiling array Genome variation profiling by high throughput sequencing Genome variation profiling by SNP array Expression profiling by high throughput sequencing	Homo sapiens	240	CEL CYCHP IDAT TXT	Jin Gu	Feb 17, 2017
GSE37085	Expression and MeDIP microarray data from IL13-induced allergic airway inflammation of mice lungs	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Mus musculus synthetic construct	14	CEL PAIR	Aik T Ooi	Apr 07, 2012
GSE40321	Constitutional Trisomy 8 Mosaicism as a Model for Epigenetic Studies of Aneuploidy	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens synthetic construct	36	CEL PAIR TXT	Josef Davidsson	Dec 01, 2012
GSE41117	Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic drivers	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens	132	CEL TXT	Jiexin Zhang	Jan 01, 2013
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Non-coding RNA profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61	BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE66078	Emergence of a developmental stage-dependent human liver disease signature demonstrated by directed differentiation of alpha-1 antitrypsin deficient iPS cells	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens synthetic construct	81	CEL IDAT	Adam C Gower	Apr 15, 2015
GSE67078	Aflatoxin B1 exposure induces epigenetic mechanisms in primary human hepatocytes revealing novel biological processes associated with hepatocellular carcinoma	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens	31	CEL PAIR TXT	Linda Rieswijk	May 10, 2016
GSE68387	IMI MARCAR Project: towards novel biomarkers for cancer risk assessment	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens Mus musculus Rattus norvegicus synthetic construct	2666	CEL CSV PAIR TXT	Jonathan Moggs	Apr 29, 2015
GSE71549	Aflatoxin B1 induces persistent epigenomic effects in primary human hepatocytes associated with hepatocellular carcinoma	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens	18	CEL PAIR TXT	Linda Rieswijk	May 10, 2016
GSE84250	Induction of changes in primary human hepatocytes by valproic acid	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens	35	CEL PAIR TXT	Simone G van Breda	Dec 15, 2017
GSE84281	Integrative "-omics" analysis in primary human hepatocytes unravels persistent mechanisms of cyclosporine A-induced cholestasis	Non-coding RNA profiling by array Methylation profiling by genome tiling array Expression profiling by array	Homo sapiens	53	CEL PAIR TXT	Jarno Wolters	Dec 06, 2016