GEO Browser - GEO - NCBI

NCBI » GEO » Repository browser » SeriesLogin

Series

Samples

Platforms

DataSets

Summary | Advanced search

14 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing				GTF
GSE32260	Relationship between DNMT1-RNA interactions, DNA methylation and gene expression	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8		BSP CEL GTF WIG	Touati Benoukraf	Dec 01, 2012
GSE47085	Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	47		BW CEL GTF	Tõnis Org	Jan 01, 2015
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47		BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE46130	Transcriptional and Epigenetic Dynamics During Specification of Human Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	10		BED GTF SRA Run Selector	Michael Johannes Ziller	May 01, 2013
GSE46692	Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Aureococcus anophagefferens Bathycoccus prasinos Cryptococcus neoformans var. grubii Cyanidioschyzon merolae Emiliania huxleyi Fragilariopsis cylindrus Leishmania major Micromonas pusilla Ostreococcus sp. 'lucimarinus' Phaeodactylum tricornutum Thalassiosira pseudonana	26		GFF GTF SRA Run Selector	Jason T Huff	Mar 13, 2014
GSE50464	RNA-Seq and BS-Seq of Sorghum bicolor tissues	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Sorghum bicolor	14		BED GTF SRA Run Selector	Andrew J Olson	Aug 29, 2014
GSE76076	Conserved imprinting associated with unique epigenetic signatures in the Arabidopsis genus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis lyrata	38		FA GTF TXT SRA Run Selector	Mary Gehring	Sep 01, 2016
GSE84897	Genome-wide analysis of DNA hydroxymethylation and methylation during epstein-barr virus infection.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8		BIGWIG GTF XLSX SRA Run Selector	Masaki Fukuyo	Apr 28, 2017
GSE109204	The Epigenetic dysregulation of lncRNA on gene expression in Colorectal tumor	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	30		GTF TXT	Zhu Hao	Dec 07, 2020
GSE118063	Multivalent H3K9me2 Reader ADCP1 Functions as a plant HP1 to Maintain Epigenetic Silencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	22		BW GTF SRA Run Selector	QIANWEN SUN	Nov 15, 2018
GSE137098	Embryonic stem cell-derived neurons as a model system for epigenome maturation during development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Third-party reanalysis	Mus musculus	53		BIGWIG GTF TXT SRA Run Selector	Ryan Lister	Jul 25, 2023
GSE185551	Oxidized 5mC modifications in fungi	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Coprinopsis cinerea Laccaria bicolor	31		COV GTF	Kotryna Kvederaviciute	Jan 13, 2022
GSE38596	Genome-wide maps of cytosine methylation, cytosine hydroxylmethylation and small non coding RNAs in mouse ES cells and upon guided differentiation to mesoendoderm cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	36		BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Sep 22, 2012
GSE32399	Regions of Focal DNA Hypermethylation and Long-Range Hypomethylation in Colorectal Cancer Coincide with Nuclear Lamina-Associated Domains	Methylation profiling by high throughput sequencing	Homo sapiens	2		GTF TXT WIG SRA Run Selector	Benjamin Berman	Sep 27, 2011