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365 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			SRA Run Selector	Joseph R Ecker
GSE79300	Functional Haploid Human Oocytes Generated from Polar Body Genomes (Bisulfite-Seq)	Methylation profiling by high throughput sequencing	Homo sapiens	2	TSV SRA Run Selector	Joseph R Ecker	Dec 07, 2016
GSE10966	Highly integrated epigenome maps in Arabidopsis - whole genome shotgun bisulfite sequencing	Methylation profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Joseph R Ecker	Apr 21, 2008
GSE124009	Loss of non-CpG methylation in inhibitory neurons impairs neural function through a mechanism that partially overlaps with Rett syndrome	Methylation profiling by high throughput sequencing	Mus musculus	6	TSV SRA Run Selector	Joseph R Ecker	Mar 16, 2020
GSE79708	Unique cell-type specific patterns of DNA methylation in the root meristem (MethylC-seq)	Methylation profiling by high throughput sequencing	Arabidopsis thaliana	9	TSV SRA Run Selector	Joseph R Ecker	Mar 31, 2016
GSE59696	The developmental potential of iPSCs is greatly influenced by the selection of the reprogramming factors	Methylation profiling by high throughput sequencing	Mus musculus	10	TSV SRA Run Selector	Joseph R Ecker	Jul 30, 2014
GSE57179	Epigenetic and transcriptional aberrations in human pluripotent stem cells reflect differences in reprogramming mechanisms	Methylation profiling by high throughput sequencing	Homo sapiens	11	TSV SRA Run Selector	Joseph R Ecker	Jul 02, 2014
GSE85708	Molecular Criteria for Defining the Naive Human Pluripotent State [methylation profiling]	Methylation profiling by high throughput sequencing	Homo sapiens	12	TSV SRA Run Selector	Joseph R Ecker	Aug 16, 2016
GSE82022	Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	18	TAR TSV SRA Run Selector	Joseph R Ecker	Dec 20, 2016
GSE111283	Global DNA methylation remodeling during direct reprogramming from fibroblast to neuron [MethylC-seq]	Methylation profiling by high throughput sequencing	Mus musculus	18	TAR SRA Run Selector	Joseph R Ecker	Jan 14, 2019
GSE108401	The Complex Architecture of Transgene Insertions	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	39	BW TSV TXT SRA Run Selector	Joseph R Ecker	Mar 16, 2018
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE47966	Global epigenomic reconfiguration during mammalian brain development	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	65	BAM TXT SRA Run Selector	Joseph R Ecker	Jul 03, 2013
GSE41753	Single-base resolution DNA methylomes of soybean recombinant inbred lines reveals heritability patterns of natural methylation variants	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Glycine max	97	TSV TXT SRA Run Selector	Joseph R Ecker	Jun 04, 2013
GSE122314	Epigenetic Control of a Multifunctional Stress Regulator	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	126	TSV TXT SRA Run Selector	Joseph R Ecker	Aug 19, 2019
GSE134507	Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180904-5J]	Methylation profiling by high throughput sequencing	Mus musculus	148	TSV SRA Run Selector	Joseph R Ecker	Sep 08, 2020
GSE112471	Robust single-cell DNA methylome profiling with snmC-seq2	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	249	TSV SRA Run Selector	Joseph R Ecker	Sep 20, 2018
GSE131354	Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA171212_4B]	Methylation profiling by high throughput sequencing	Mus musculus	296	TSV SRA Run Selector	Joseph R Ecker	Aug 20, 2020
GSE132126	Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180319_2D]	Methylation profiling by high throughput sequencing	Mus musculus	314	TSV SRA Run Selector	Joseph R Ecker	Aug 24, 2020
GSE221040	Epigenetic landscape of Human Brains by Single Nucleus DNA Methylation and Chromatin Conformation Profiling - m3c10_h1930002_FI	Methylation profiling by high throughput sequencing Other	Homo sapiens	374	TSV SRA Run Selector	Joseph R Ecker	Jul 05, 2023
GSE157868	Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA190625_10E]	Methylation profiling by high throughput sequencing	Mus musculus	484	TSV SRA Run Selector	Joseph R Ecker	Sep 14, 2020