GEO Browser - GEO

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58 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			TAB
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE42629	Density and methylation state of CpG dinucleotides define histone variant specific retention of nucleosomes in mouse spermatozoa	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	21	TAB WIG SRA Run Selector	Antoine Peters	Jun 15, 2013
GSE52330	Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain (Bisulfite-seq)	Methylation profiling by high throughput sequencing	Mus musculus	2	TAB SRA Run Selector	Junjie Guo	Dec 22, 2013
GSE52331	Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	5	TAB	Junjie Guo	Dec 22, 2013
GSE56298	Allele-Specific Methylation Occurs at Genetic Variants Associated with Complex Disease	Methylation profiling by high throughput sequencing	Homo sapiens	82	TAB SRA Run Selector	John N Hutchinson	Jul 01, 2014
GSE48519	5mC Oxidation by Tet2 Modulates Enhancer Activity and Timing of Transcriptome Reprogramming during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	92	BW TAB TXT SRA Run Selector	Gary Chung Hon	Sep 25, 2014
GSE65037	Deconstruction of DNA methylation patterns during myogenesis reveals specific epigenetic events in the establishment of the skeletal muscle lineage	Methylation profiling by high throughput sequencing	Mus musculus	23	TAB SRA Run Selector	Miguel A Peinado	Jan 16, 2015
GSE57411	Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	6	TAB SRA Run Selector	Dirk Schuebeler	Jan 20, 2015
GSE57413	Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	TAB WIG	Dirk Schuebeler	Jan 22, 2015
GSE58108	Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TAB SRA Run Selector	Harald Oey	Mar 24, 2015
GSE67299	Frequent and Transient Acquisition of Pluripotency During Somatic Cell Trans-Differentiation with iPSCs Reprogramming Factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED TAB	Noa Novershtern	Apr 30, 2015
GSE66456	Targeted bisulfite sequencing to detect TALE-DNMT mediated targeted DNA methylation in human cells	Methylation profiling by high throughput sequencing	Homo sapiens	42	TAB SRA Run Selector	Diana Bernstein	May 01, 2015
GSE68601	Frequent and Transient Acquisition of Pluripotency During Somatic Cell Trans-Differentiation with iPSCs Reprogramming Factors (WGBS)	Methylation profiling by high throughput sequencing	Mus musculus	4	TAB SRA Run Selector	Noa Novershtern	May 07, 2015
GSE69595	BisPCR2 method for targeted bisulfite sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	10	TAB SRA Run Selector	Diana Bernstein	Jul 15, 2015
GSE68618	Aging-dependent demethylation of regulatory elements correlates with chromatin state and improved insulin secretion by pancreatic β cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	16	TAB TXT SRA Run Selector	Dana Avrahami Tzfati	Sep 01, 2015
GSE72629	Acute loss of TET function results in aggressive myeloid cancer in mice [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	6	TAB SRA Run Selector	Anjana Rao	Nov 26, 2015
GSE76970	Reversion to naïve human pluripotency creates a new methylation landscape devoid of blastocyst or germline memory	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	43	TAB TXT SRA Run Selector	William Abraham Pastor	Feb 04, 2016
GSE73868	High throughput bisulfite sequencing of the MLH1 promoter in human hematiopoietic progenitor cell clones	Methylation profiling by high throughput sequencing	Homo sapiens	39	CSV TAB SRA Run Selector	Jonathan D Kenyon	Feb 09, 2017
GSE98064	Iron-Deficiency in Pregnancy: Effects on the Rat Hippocampus	Methylation profiling by high throughput sequencing	Rattus norvegicus	6	TAB SRA Run Selector	Rebecca A Simmons	Apr 26, 2017
GSE82310	Genome-wide DNA methylation profiling reveals epigenetic adaptation of stickleback to sea and freshwater conditions	Methylation profiling by high throughput sequencing	Gasterosteus aculeatus	12	BED TAB SRA Run Selector	Artem V Artemov	May 30, 2017