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283 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		TSV
GSE190371	Vitamin C deficiency causes cell type-specific epigenetic reprogramming and acute tubular necrosis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	16	BEDGRAPH MTX TSV TXT SRA Run Selector	Zihui Yu	Dec 09, 2021
GSE165023	Sstr2 knockout mice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG BW MTX TSV	Byoung-Ha Yoon	Jan 04, 2023
GSE226689	Revisiting chromatin packaging in mouse sperm	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BW MCOOL TSV	Qiangzong Yin	Mar 10, 2023
GSE240249	Revisiting chromatin packaging in mouse sperm [Nanopore-methylation]	Methylation profiling by high throughput sequencing	Mus musculus	2	TSV	Qiangzong Yin	Aug 07, 2023
GSE225614	Ultrafast Bisulfite Sequencing for Efficient and Accurate 5-Methylcytosine Detection in DNA and RNA	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BW TSV	Chang Ye	Oct 13, 2023
GSE180218	Germ cell-specific eIF4E1b regulates maternal mRNA translation to ensure zygotic genome activation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	602	BW TSV	Guanghui Yang	Jun 07, 2023
GSE200685	Germ-cell specific eIF4E1b regulates maternal mRNA translation to ensure zygotic genome activation [NOMe-seq]	Methylation profiling by high throughput sequencing	Mus musculus	192	TSV	Guanghui Yang	Jun 08, 2023
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE146250	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	78	BED BW TSV	Beisi Xu	Dec 14, 2021
GSE85356	DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	285	BEDGRAPH COV TSV TXT	Jieyi Xiong	Jun 18, 2020
GSE215954	Precision pharmacological reversal of strain-specific diet-induced metabolic syndrome in mice informed by epigenetic and transcriptional regulation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	96	TSV TXT	Phillip Wulfridge	Oct 17, 2023
GSE222328	A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells [BiSulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	1080	TSV SRA Run Selector	SHOU-WEN WANG	Oct 18, 2023
GSE222486	A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	1341	H5 TSV	SHOU-WEN WANG	Oct 18, 2023
GSE149603	Reduced representation bisulfite sequencing (RRBS) of xenografts of mouse breast cancer cell line treated with C29, 5-aza-2'-deoxycytidine or a combination of both	Methylation profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Mathieu Vernier	Sep 14, 2020
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	BIGWIG BW MTX NARROWPEAK RDS TSV TXT	Bernard Klaas van der Veer	Apr 12, 2023
GSE199806	DNA methyltransferases 3A and 3B target specific sequences during mouse gastrulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	712	CSV TSV TXT XLSX	Amos Tanay	Nov 02, 2022
GSE185005	Induction of mouse totipotent stem cells by a defined chemical cocktail	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BW MTX NARROWPEAK TSV	Pengcheng Tan	May 25, 2022
GSE47819	Epigenetic and genetic changes during mouse hematopoietic stem cell aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	37	BED TSV	deqiang sun	Apr 30, 2014
GSE50793	Role of de novo DNA methyltransferases in hematopoietic stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BED TSV	deqiang sun	Aug 19, 2014
GSE171998	Transcriptional reprogramming of skeletal muscle stem cells by the niche environment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BIGWIG MAT NARROWPEAK TSV TXT	Vahab Soleimani	Mar 17, 2022