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102 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		XLSX
GSE56697	Programming and inheritance of parental DNA methylomes in mammals	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	13	BED XLSX SRA Run Selector	Lu Wang	May 12, 2014
GSE79882	Genome-wide map of DNA 5-Hydroxymethylcytosine in cardiomyocytes isolated from E14.5, Neonatal, Adult, pressure-overload (TAC), sh-control and sh-TET2 isolated cardiomyocytes	Methylation profiling by high throughput sequencing	Mus musculus	22	BED BIGWIG XLSX SRA Run Selector	Paolo Kunderfranco	Jun 21, 2016
GSE89010	Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	200	BED XLS XLSX SRA Run Selector	giovanni iacono	Mar 07, 2018
GSE90958	ncRNA transcription-induced changes in nuclear architecture directs with high precision enhancer-promoter interaction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	80	BED BEDGRAPH TXT XLSX SRA Run Selector	Kees Murre	Sep 18, 2017
GSE101905	Transient and permanent reconfiguration of chromatin and transcription factor occupancy drive reprogramming	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	85	BED BIGWIG TXT XLSX SRA Run Selector	Ryan Lister	Dec 06, 2017
GSE104543	Characterisation of the effects of in situ fixation on DNA methylation levels	Methylation profiling by high throughput sequencing	Mus musculus	8	BED XLSX SRA Run Selector	Rachel Legendre	Nov 13, 2017
GSE112276	Transcriptome Mapping of Internal N7-methylguanosine Methylome in Mammalian mRNA	Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	BED FPKM_TRACKING TXT XLSX SRA Run Selector	Li-Sheng Zhang	Apr 26, 2019
GSE123133	Transcriptonal and epigenetic changes of adult liver cells in vivo and in vitro	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	42	BED BEDGRAPH TSV TXT XLSX SRA Run Selector	Charles Bradshaw	Aug 29, 2019
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE129691	Setd2 deficiency impaired erythroid differentiation and accelerated Myelodysplastic Syndrome(MDS) - associated leukemogenesis through S100A8 and S100A9	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BED BROADPEAK BW COV TXT XLSX SRA Run Selector	Jiaying Zhang	Jul 02, 2020
GSE130384	Cdk5-mediated phosphorylation ensures robust neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED BW XLSX SRA Run Selector	Swarnaseetha Adusumalli	Nov 29, 2019
GSE131316	m6A-Label-seq directly reports m6A methylome at base resolution	Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED TXT XLS XLSX SRA Run Selector	Jie Cao	Apr 21, 2020
GSE135462	Dynamic analysis of m6A methylation spectroscopy during progression and reversal of hepatic fibrosis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	26	BED XLSX SRA Run Selector	ZHONGQI CUI	Jul 01, 2022
GSE146140	m6A-seq analysis of Wild Type and Mettl3-/- BMDMs (bone-marrow-derived macrophages) Transcriptomes	Methylation profiling by high throughput sequencing	Mus musculus	8	BED XLSX SRA Run Selector	Huilong Yin	Jan 19, 2021
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE165256	Genome-wide maps of m5C methylation in neuron of mouse.	Methylation profiling by high throughput sequencing	Mus musculus	18	BED XLSX SRA Run Selector	Huan Jian	Jan 22, 2021
GSE188518	Analysis of m6A methylome in ABRO1 Knockout heart	Methylation profiling by high throughput sequencing	Mus musculus	4	BED XLSX SRA Run Selector	Kun Wang	Dec 01, 2023
GSE194050	Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED XLSX	Xiaofei Gao	Jan 23, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024