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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterMethylation profiling by high throughput sequencing Remove filterOryza sativa
GSE19602
Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids.
  • Link icon Oryza sativa
24 guangming he Jan 20, 2010
GSE21152
Conservation and divergence of methylation patterning in plants and animals
  • Methylation profiling by high throughput sequencing
14 matteo Pellegrini Apr 09, 2010
GSE19824
Genome-wide evolutionary analysis of eukaryotic DNA methylation
33 Toshiro Nishimura Apr 15, 2010
GSE21414
Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with rice centromeres
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
1 Yufeng Wu Apr 22, 2010
GSE22591
Local DNA hypomethylation activates genes in rice endosperm
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
4 Toshiro Nishimura Nov 01, 2010
GSE42410
Plants regenerated from tissue culture contain stable epigenome changes in rice
  • Link icon Oryza sativa
37 Hume Stroud Mar 26, 2013
GSE44898
Imprinted expression of genes and small RNA is triggered by localized demethylation of the maternal genome in rice endosperm
  • Link icon Oryza sativa
16 Toshiro Nishimura May 01, 2013
GSE57062
Improved tagmentation-based whole genome bisulfite sequencing for input DNA from less than 100 cells
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
7 Desheng Gong May 01, 2014
GSE57706
Genome-wide maps of DNA methylation state in rice embryo and endosperm
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
13 yijing zhang Sep 01, 2015
GSE60288
Single-base resolution DNA methylation maps of rice cultivars under control and stress conditions
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
7 Mukesh Jain Dec 31, 2015
GSE89789
DNA demethylation is initiated in the central cells of Arabidopsis and rice
  • Methylation profiling by high throughput sequencing
5 Xiaoqi Feng Nov 30, 2016
GSE77710
Both maternally and paternally imprinted genes regulate seed development in rice
  • Link icon Oryza sativa
14 Jingya Yuan Feb 04, 2017
GSE95107
DNA demethylation activates genes in seed maternal integument development in rice (Oryza sativa L.)
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
6 Jian zhang Oct 10, 2017
GSE79154
A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [Bisulfite-seq]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
3 yiwen Deng Mar 08, 2018
GSE79155
A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice [MeDIP-seq]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
2 yiwen Deng Mar 08, 2018
GSE115372
RNA-seq and DNA methylomes of germinating rice and developing coleoptiles (Methyl-Seq)
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
18 Reena Narsai Jun 11, 2018
GSE115373
RNA-seq and DNA methylomes of germinating rice and developing coleoptiles
  • Link icon Oryza sativa
66 Reena Narsai Jun 11, 2018
GSE116581
fruitENCODE: An encyclopedia of DNA elements for fruit ripening
282 Silin Zhong Jul 04, 2018
GSE117187
Whole-genome bisulfite sequencing of wild-type and thick aleurone 2-1 (ta2-1) mutant in rice
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Jinxin Liu Nov 14, 2018
GSE108777
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [MeDIP-seq 93-11]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Xiaofeng Gu Dec 10, 2018