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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterMethylation profiling by high throughput sequencing Remove filterOryza sativa
GSE108780
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [SMRT sequencing 93-11]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
1 Xiaofeng Gu Dec 10, 2018
GSE108781
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [MeDIP-seq Nipponbare]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
3 Xiaofeng Gu Dec 10, 2018
GSE108783
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses[SMRT sequencing Nipponbare]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
1 Xiaofeng Gu Dec 10, 2018
GSE108784
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses
  • Link icon Oryza sativa
22 Xiaofeng Gu Dec 10, 2018
GSE121274
N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses [BiSulfite-seq]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
4 Xiaofeng Gu Dec 10, 2018
GSE126791
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
4 M. Yvonne Kim Feb 21, 2019
GSE111944
Characterization of functional relationships of R-loops with gene transcription and epigenetic modifications in rice
  • Methylation profiling by high throughput sequencing
  • Other
  • Link icon Oryza sativa
10 Fang Yuan Mar 07, 2019
GSE94319
A genome-wide survey of DNA methylation in OsNAR2.1 transgenic plants
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
15 Xiaorong Fan Jan 31, 2020
GSE129979
Antibody-free enzyme-assisted chemical approach for detection of N6-methyladenosine
  • Methylation profiling by high throughput sequencing
16 Ye Wang Apr 22, 2020
GSE142568
Integrative analysis of reference epigenomes in rice [BiSulfite-seq]
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
38 Liang Xie Apr 25, 2020
GSE142570
Integrative analysis of reference epigenomes in rice
  • Link icon Oryza sativa
513 Liang Xie Apr 25, 2020
GSE130064
DNA hypomethylation confers enhanced immunity against parasitic nematodes in plants
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
6 Jeroen Galle Jul 07, 2020
GSE155264
BS-Seq for oschz1 mutant
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
4 Liufan Yin Oct 15, 2020
GSE155269
OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice
  • Link icon Oryza sativa
34 Liufan Yin Oct 15, 2020
GSE150378
Alterations of rice (Oryza sativa L.) DNA methylation patterns associated with gene expression in response to Rice black-streaked dwarf virus
  • Link icon Oryza sativa
12 Linying Li Oct 28, 2020
GSE126444
Evolution of heterochromatin and heterochromatin genes in the Oryza genomes reveals a new heterochromatin-euchromatin boundary
47 Lei Li Dec 02, 2020
GSE144562
Reorganization of 3D chromatin architecture of rice genomes during heat stress (Bisulfite-seq)
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
8 Xiaofeng Gu Feb 26, 2021
GSE144563
Reorganization of 3D chromatin architecture of rice genomes during heat stress (MeDIP-Seq)
  • Methylation profiling by high throughput sequencing
  • Link icon Oryza sativa
6 Xiaofeng Gu Feb 26, 2021
GSE138705
Multiplex genome editing uncovers a class of non-CG methylation specific for GC-rich regions in rice
  • Link icon Oryza sativa
64 yiming yu Jun 24, 2021
GSE130122
Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting
  • Link icon Oryza sativa
74 Daniel Zilberman Jun 29, 2021