GEO Browser - GEO

Series

Samples

Platforms

DataSets

29 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Gallus gallus
GSE21167	Examination of whole genome DNA methylation status of two chicken breeds	Methylation profiling by high throughput sequencing	Gallus gallus	4	TXT SRA Run Selector	qinghe li	Apr 02, 2010
GSE21170	Genome-wide Differential DNA Methylation in the Wild and Domestic Chicken	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus	8	TXT	qinghe li	Apr 02, 2010
GSE42751	Comparison of the genome-wide DNA methylation profiles between fast-growing and slow-growing broilers	Methylation profiling by high throughput sequencing	Gallus gallus	4	TXT SRA Run Selector	Xinzheng Jia	Dec 06, 2012
GSE43512	Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates	Methylation profiling by high throughput sequencing	Anolis carolinensis Danio rerio Gallus gallus Homo sapiens Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	24	BED SRA Run Selector	David Sims	Jan 22, 2013
GSE56639	Evolutionary consequences of DNA methylation on the GC content in vertebrate genomes	Methylation profiling by high throughput sequencing Third-party reanalysis	Gallus gallus	1	TXT SRA Run Selector	Hans Ellegren	Jan 23, 2015
GSE56975	Single-base resolution DNA methylation profiles of two highly inbred chicken lines, Leghorn and Fayoumi, by whole-genome bisulfite sequencing (MethylC-seq).	Methylation profiling by high throughput sequencing	Gallus gallus	2	TXT SRA Run Selector	Jinxiu Li	Jun 28, 2015
GSE56984	Methylome Analysis in Chickens Immunized with Infectious Laryngotracheitis Vaccine	Methylation profiling by high throughput sequencing	Gallus gallus	12	BED TXT SRA Run Selector	Jose Adrian Carrillo	Aug 28, 2014
GSE99129	Genome-wide DNA methylation in Tibetan chicken and Chahua chicken embryos	Methylation profiling by high throughput sequencing	Gallus gallus	6	WIG SRA Run Selector	Yawen Zhang	May 23, 2017
GSE104355	Ogye body map RRBS data	Methylation profiling by high throughput sequencing	Gallus gallus	20	FASTA TXT SRA Run Selector	Jin-Wu Nam	Jun 21, 2018
GSE104358	Ogye body map	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Gallus gallus	60	TXT	Jin-Wu Nam	Jun 21, 2018
GSE128053	A homeostasis hypothesis of avian influenza resistance in chickens	Methylation profiling by high throughput sequencing	Gallus gallus	8	COV SRA Run Selector	Jing An	Mar 15, 2019
GSE141609	Evolution of CpH methylation in vertebrate brains	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Apis mellifera Branchiostoma lanceolatum Callorhinchus milii Danio rerio Gallus gallus Lethenteron camtschaticum Monodelphis domestica Octopus bimaculoides Ornithorhynchus anatinus	11	CGMAP TSV SRA Run Selector	Ryan Lister	Oct 26, 2020
GSE143336	MeDIP-Seq for ALV-J-susceptible and ALV-J-resistant chickens	Methylation profiling by high throughput sequencing	Gallus gallus	12	BED SRA Run Selector	Yiming Yan	Jan 10, 2020
GSE146620	The dynamic methylome of the broiler chicken as a resource for livestock performance biomarker development	Methylation profiling by high throughput sequencing	Gallus gallus	51	BEDGRAPH SRA Run Selector	Guenter Raddatz	Nov 30, 2020
GSE160494	Transcriptomic and epigenetic preservation of genetic sex identity in estrogen-feminized male chicken embryonic gonads	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Gallus gallus	58	TXT XLSX SRA Run Selector	Toshi Shioda	Oct 31, 2020
GSE166240	Transcriptome-wide N6-methyladenosine modification profiling of long non-coding RNAs and circular RNA during growth of Marek’s disease virus in vitro	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Gallus gallus	12	BED XLSX SRA Run Selector	ZHU Xiaojing Xiaojing ZHU	Apr 28, 2021
GSE175615	Conservation and divergence of DNA methylation patterns and functions in vertebrates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Gallus gallus Homo sapiens Mus musculus Oryctolagus cuniculus Sus scrofa	62	BW IGV SRA Run Selector	Michael Weber	Mar 23, 2022
GSE185775	Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Gallus gallus Monodelphis domestica Mus musculus	88	BW HIC	Michael I Robson	Sep 29, 2022
GSE186742	Embryonic heat conditioning in chicks induces transgenerational heat/immunological resilience via methylation on regulatory elements	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus	28	BEDGRAPH XLSX SRA Run Selector	‪Tali Rosenberg‬‏	Jun 26, 2022
GSE189564	Early-life thermal stress mediates long-term alterations in hypothalamic microglia [RRBS]	Methylation profiling by high throughput sequencing	Gallus gallus	7	TXT	Tatiana Kisliouk	Dec 21, 2021