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440 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Homo sapiens		BED
GSE96635	Abnormal RNA splicing and genomic instability after induction of DNMT3A mutations by CRISPR/Cas9 gene editing	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	23	XLSX BED	Valentina Giudice	Jan 09, 2018
GSE109538	Determining gestational age using genome methylation profile	Methylation profiling by high throughput sequencing	Homo sapiens	81	XLSX BED SRA Run Selector	Tal Michaeli	Jul 18, 2019
GSE112276	Transcriptome Mapping of Internal N7-methylguanosine Methylome in Mammalian mRNA	Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	104	XLSX TXT FPKM_TRACKING BED SRA Run Selector	Li-Sheng Zhang	Apr 26, 2019
GSE122413	Effects of NSUN2 deficiency on the mRNA 5-methylcytosine modification and gene expression profile in HEK293 cells	Methylation profiling by high throughput sequencing	Homo sapiens	2	XLSX BED SRA Run Selector	Zhen Sun	Nov 16, 2018
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	XLSX BED SRA Run Selector	Mike Levine	Jan 17, 2020
GSE131316	m6A-Label-seq directly reports m6A methylome at base resolution	Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	XLSX XLS TXT BED SRA Run Selector	Jie Cao	Apr 21, 2020
GSE149679	Comparative analysis of genome-wide DNA methylation identifies patterns that associate with conserved transcriptional programs in osteosarcoma	Methylation profiling by high throughput sequencing	Canis lupus familiaris Homo sapiens	68	XLSX TXT BED SRA Run Selector	Lauren Mills	May 01, 2020
GSE171373	MeRIP-seq analysis of transcript profiles during human umbilical cord mesenchymal stem cells osteogenic differentiation	Methylation profiling by high throughput sequencing	Homo sapiens	12	XLSX BED SRA Run Selector	Wenchuan Chen	May 31, 2021
GSE185494	KIAA1429/VIRMA promotes breast cancer proliferation and migration by stabilizing m6A-modified HAS2 RNA expression in cytosol	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	13	XLSX BW BED SRA Run Selector	Na Li	Nov 02, 2021
GSE190388	Comprehensive analysis of differentially expressed profiles of mRNA N6-methyladenosine in colorectal cancer	Methylation profiling by high throughput sequencing	Homo sapiens	20	XLSX BED SRA Run Selector	Qin Guo	Feb 02, 2022
GSE194050	Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus	Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	XLSX BED	Xiaofei Gao	Jan 23, 2022
GSE201096	m7G-MeRIP-sequencing of mRNA in drug-resistant acute myeloid leukemia	Methylation profiling by high throughput sequencing	Homo sapiens	4	XLSX BED	bing zhang	Apr 23, 2022
GSE206560	circRNA-sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	12	XLSX BED	Dachuan Wang	Oct 31, 2022
GSE74426	Obesity and Bariatric Surgery Drive Epigenetic Variation of Spermatozoa in Humans	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	77	XLS CSV BED SRA Run Selector	Lars Roed Ingerslev	Dec 04, 2015
GSE112970	Dynamic m6A mRNA methylation reveals novel insights into mechanisms of chemical carcinogenesis	Methylation profiling by high throughput sequencing	Homo sapiens	14	XLS BED SRA Run Selector	Shuibin Lin	Dec 01, 2018
GSE149562	Identification of differential DNA methylation associated with multiple sclerosis: a family-based study	Methylation profiling by high throughput sequencing	Homo sapiens	102	XLS BED SRA Run Selector	Jose Manuel Garcia-Manteiga	May 01, 2021
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	WIG BED BAM SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	WIG TAB BED BAM SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE28254	Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	WIG BED SRA Run Selector	Arjen Brinkman	Mar 27, 2012
GSE30558	Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	2	WIG CSV BED BAM SRA Run Selector	Mark Robinson	Jan 18, 2012