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1276 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Homo sapiens		SRA Run Selector
GSE83595	“Same Difference”: Comprehensive evaluation of four DNA methylation measurement platforms	Methylation profiling by high throughput sequencing	Homo sapiens	7	TXT SRA Run Selector	Thadeous James Kacmarczyk	Jun 22, 2016
GSE154280	“Reprogram enablement” as an assay for identifying pivotal early oncogenic pathways by their ability to allow neoplastic cells to reacquire a normal epiblast-emulating state: evidence from human thyroid cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	10	BW TXT XLSX SRA Run Selector	Ryan C. Gimple	Aug 13, 2020
GSE51867	whole-genome bisulfite sequencing (BS-seq) of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)	Methylation profiling by high throughput sequencing	Homo sapiens	3	TXT SRA Run Selector	Helene Bierne	Dec 11, 2015
GSE129469	piRNA-30473 contributes to tumorigenesis by regulating RNA m6A-methylation in DLBCL	Methylation profiling by high throughput sequencing	Homo sapiens	4	TAR SRA Run Selector	Wenzhuo Zhuang	Apr 08, 2021
GSE189608	miCLIP in METTL14 R298P mutation knock-in cell clones	Methylation profiling by high throughput sequencing	Homo sapiens	3	BED SRA Run Selector	Atsushi Kumanogoh	Nov 29, 2021
GSE55569	methylSig: a whole genome DNA methylation analysis pipeline	Methylation profiling by high throughput sequencing	Homo sapiens	8	TXT SRA Run Selector	Maria Eugenia Figueroa	Aug 22, 2014
GSE147238	meCLICK-Seq - substrate-hijacking and RNA degradation strategy for the study of RNA methylation	Methylation profiling by high throughput sequencing	Homo sapiens	18	BROADPEAK BW SRA Run Selector	Muxin Gu	Oct 12, 2020
GSE182148	mRNA bisulfite-sequencing of pancreatic cancer cells	Methylation profiling by high throughput sequencing Other	Homo sapiens	15	XLSX SRA Run Selector	Po-Hsien Huang	May 02, 2022
GSE113798	m6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	25	SRA Run Selector	Mareen Engel	Jul 10, 2018
GSE137725	m6A-seq of melanoma parental and persister cells	Methylation profiling by high throughput sequencing	Homo sapiens	12	BW SRA Run Selector	Shensi SHEN	Sep 20, 2019
GSE107954	m6A-seq mapping of human umbilical cord blood hematopoietic stem/progenitor cells	Methylation profiling by high throughput sequencing	Homo sapiens	6	BW SRA Run Selector	Madelaine Gogol	Aug 17, 2018
GSE119026	m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	43	TXT XLSX SRA Run Selector	Agne Antanaviciute	Oct 15, 2019
GSE131316	m6A-Label-seq directly reports m6A methylome at base resolution	Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED TXT XLS XLSX SRA Run Selector	Jie Cao	Apr 21, 2020
GSE144032	m6A profiling of early, adolescent, aged and Alzheimer brains	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	58	TXT XLS XLSX SRA Run Selector	Andrew Shafik	Nov 20, 2020
GSE140020	m6A modification in cisplatin-resistant cells	Methylation profiling by high throughput sequencing	Homo sapiens	4	XLSX SRA Run Selector	Jiahui Chu	Nov 04, 2022
GSE167075	m6A modification in SARS-CoV-2 virus regulates host cell innate immune response	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Chlorocebus aethiops Homo sapiens Severe acute respiratory syndrome coronavirus 2	16	BEDGRAPH BW XLSX SRA Run Selector	Na Li	Apr 27, 2021
GSE189160	m6A modification in Herceptin resistant cells [MeRIP-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	12	XLSX SRA Run Selector	yongfei li	Nov 18, 2024
GSE183014	m6A methylome in WT- and K177Q-METTL3 reconstituting MDA-MB-231 cells as well as in METTL3-deficient MDA-MB-231 cells.	Methylation profiling by high throughput sequencing	Homo sapiens	8	BW SRA Run Selector	Yuanpei Li	Sep 20, 2022
GSE99953	hMeDIP sequencing of human leukemia cells	Methylation profiling by high throughput sequencing	Homo sapiens	12	BED SRA Run Selector	Igor Dolgalev	Aug 21, 2017
GSE93203	ctDNA methylation markers in diagnosis and prognosis of hepatocellular carcinoma	Methylation profiling by high throughput sequencing	Homo sapiens	2191	TXT SRA Run Selector	Kang Zhang	Jan 01, 2019