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949 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Homo sapiens		TXT
GSE14966	Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	32	TXT	Rami Rauch	Mar 06, 2009
GSE15007	Digital DNA methylation analysis of stem cell reprogramming by targeted bisulfite sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	12	BED TXT	Kun Zhang	Apr 27, 2009
GSE17001	High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Emily Hodges	Jul 08, 2009
GSE19418	Dynamic Changes in the Human Methylome During Differentiation	Methylation profiling by high throughput sequencing	Homo sapiens	3	TXT SRA Run Selector	Chia-Lin Wei	Dec 29, 2009
GSE21242	Chromatin and Sequence Features that Define the Fine and Gross Structure of Genomics Methylation Patterns	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BED TXT SRA Run Selector	John R. Edwards	Apr 16, 2010
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	CEL TXT	matteo Pellegrini	May 29, 2010
GSE21821	Relationship between nucleosome positioning and DNA methylation: Bisulfite-Seq, ChIP-Seq, and Mnase-Seq	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Homo sapiens	4	TXT SRA Run Selector	matteo Pellegrini	May 29, 2010
GSE17972	The DNA methylome of human peripheral blood mononuclear cells	Methylation profiling by high throughput sequencing	Homo sapiens	77	TXT SRA Run Selector	Hong zhi Cao	Sep 04, 2010
GSE24546	Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias and copy number variation	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Genome variation profiling by SNP array	Homo sapiens	40	CEL MAP TXT SRA Run Selector	Mark Robinson	Oct 08, 2010
GSE26139	Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium [MSDK-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	12	TXT SRA Run Selector	Kornelia Polyak	Mar 01, 2011
GSE26141	Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	41	TXT	Kornelia Polyak	Mar 01, 2011
GSE27003	Deep Sequence Analysis of the Relationship between Gene Expression, CpG Island Methylation, and Gene Copy Number in Breast Cancer Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	TXT SRA Run Selector	Zhifu Sun	Mar 16, 2011
GSE27619	Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer	Expression profiling by array Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	39	BAM TXT	Jung Kim	May 03, 2011
GSE29071	High-throughput sequencing of ES cell lines, ES-derived cells, and fetal and normal livers	Methylation profiling by high throughput sequencing	Homo sapiens	17	TXT	Rami Rauch	May 05, 2011
GSE27618	DNA methylation analysis of prostate cancer cell lines and tissues using Next Generation Sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	9	TXT SRA Run Selector	Jung Kim	May 09, 2011
GSE27627	5-hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells.	Methylation profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Hume Stroud	Jun 13, 2011
GSE30253	Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation	Methylation profiling by high throughput sequencing	Homo sapiens	8	TXT SRA Run Selector	Jason Gertz	Jul 01, 2011
GSE26826	Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	8	TXT SRA Run Selector	Huidong Shi	Aug 01, 2011
GSE22376	Phyloepigenetic comparison of apes	Methylation profiling by high throughput sequencing	Homo sapiens Pan troglodytes Pongo pygmaeus	11	TXT WIG SRA Run Selector	Dario Boffelli	Sep 09, 2011
GSE32399	Regions of Focal DNA Hypermethylation and Long-Range Hypomethylation in Colorectal Cancer Coincide with Nuclear Lamina-Associated Domains	Methylation profiling by high throughput sequencing	Homo sapiens	2	GTF TXT WIG SRA Run Selector	Benjamin Berman	Sep 27, 2011