2134 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE53984
Identification of Replication Timing Domains Using DNN-HMM
  • Download icon BED
Wenjie Shu May 25, 2015
GSE80795
CpG island mediated linear and spatial gene partitioning (other data sets)
Jonghwan Kim Feb 15, 2018
GSE97092
The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains II (re-analysis)
Karen Reddy Mar 27, 2020
GSE161378
DBX2 REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS [HiC reanalysis]
Lucille Lopez-Delisle Jan 23, 2021
GSE248644
Reanalysis of TSA-Seq mapping to determine genomic coordinates for speckles-associated domains.
Parmit Kumar Singh Dec 01, 2023
GSE29779
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability [sequence data]
  • Other
1 Neelanjan Mukherjee Aug 19, 2011
GSE42929
Next-generation sequencing of Okazaki fragments extracted from Saccharomyces cerevisiae
  • Other
1 Wenchao Yang Jun 18, 2013
GSE49302
Hot spots of DNA double-strand breaks and genomic contacts of human rDNA units are involved in epigenetic regulation [DSBs]
  • Other
1 Nickolai Tchurikov Oct 04, 2014
GSE52281
4C-seq indicate interactive sites with the sequence close from Meis2 promoter
  • Other
1 Takaho A. Endo Jan 15, 2014
GSE61972
Allele-Specific Analysis of DNA Replication Origins in Mammalian Cells
  • Other
1 Eric E Bouhassira May 19, 2015
GSE63399
Ets homologous factor regulates pathways controlling response to injury in Calu-3 airway epithelial cells [DNAse-seq]
  • Other
1 Ann Harris Dec 23, 2014
GSE77700
Distinct and shared molecular targets and functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [CLIP-Seq]
  • Other
1 Gene Yeo Jul 05, 2016
GSE86041
HNRNPA2B1 regulates alternative RNA processing in the nervous system and accumulates in granules in ALS IPSC-derived motor neurons [iCLIP-seq]
  • Other
1 Gene Yeo Oct 20, 2016
GSE95360
Identification of PARP1-RNA binding in-vivo using PAR-CLiP Sequencing
  • Other
1 Eric Christian Rouchka Feb 14, 2018
GSE98659
Natural RNA polymerase aptamers regulate transcription in E. coli [SELEX]
  • Other
1 Philipp Rescheneder Jun 01, 2017
GSE113405
HepG2 Hi-C
  • Other
1 Abdulrahman Salhab Oct 08, 2018
GSE114656
MyoD induced enhancer RNA interacts with hnRNPL protein via CAAA motif to activate target gene transcription during myogenic differentiation [CLIP-Seq]
  • Other
1 Jiajian Zhou Oct 03, 2019
GSE126716
PARIS analysis of mouse Xist RNA structure
  • Other
1 Zhipeng Lu Apr 23, 2020
GSE128396
Multileveled reduction of p21 expression by Linc-ASEN represses cellular senescence [ChIRP-seq]
  • Other
1 Donghee Kang Sep 24, 2019
GSE134393
Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and pervasive recursive splicing [primer extension]
  • Other
1 Daniel R Larson May 13, 2021