GEO Browser - GEO

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2510 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			BW
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE109003	Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity	Expression profiling by high throughput sequencing Other	Homo sapiens	10	BAM BW SRA Run Selector	Steven West	Feb 13, 2018
GSE109561	Transcriptome-wide view of endosomal mRNP transport	Other Expression profiling by high throughput sequencing	Ustilago maydis	12	BAM BW	Kathi Zarnack	Dec 10, 2018
GSE141290	Pervasive promoter-proximal regulation in archaea	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Saccharolobus solfataricus Saccharolobus solfataricus P2	84	BAM BW	Finn Werner	Sep 14, 2020
GSE155280	scChIX-seq infers dynamic relationships between histone modifications in single cells	Other	Mus musculus	33	BAM BW CSV RDATA TXT SRA Run Selector	Jake Yeung	Nov 30, 2021
GSE45242	HoxD locus	Other Genome binding/occupancy profiling by genome tiling array Expression profiling by genome tiling array Expression profiling by high throughput sequencing	Atelerix albiventris Mus musculus	32	BAR BED BEDGRAPH BW CEL	Marion LELEU	Oct 23, 2013
GSE62269	Convergent evolution of complex regulatory landscapes and pleiotropy at Hox loci	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by genome tiling array	Mus musculus	10	BAR BEDGRAPH BW CEL	Nicolas Lonfat	Nov 21, 2014
GSE42819	The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	5	BB BW SRA Run Selector	Thomas A Down	Mar 29, 2013
GSE77629	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - 293T cells]	Other	Homo sapiens	24	BB BED BW SRA Run Selector	Gene Yeo	Mar 28, 2016
GSE77633	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [iCLIP]	Other	Homo sapiens	1	BB BW SRA Run Selector	Gene Yeo	Mar 28, 2016
GSE77634	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	100	BB BED BW CEL	Gene Yeo	Mar 28, 2016
GSE80039	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - HepG2/K562 cells]	Other	Homo sapiens	63	BB BED BW SRA Run Selector	Gene Yeo	Apr 07, 2016
GSE81553	TSA-Seq Mapping of Nuclear Genome Organization [seq]	Other	Homo sapiens	43	BB BED BW SRA Run Selector	Andrew S Belmont	Apr 25, 2018
GSE86035	SONAR discovers RNA binding proteins from analysis of large-scale protein-protein interactomes.	Other	Homo sapiens	17	BB BED BW SRA Run Selector	Gene Yeo	Oct 06, 2016
GSE101938	Variation in single-nucleotide sensitivity of eCLIP derived from reverse transcription conditions	Other	Homo sapiens	62	BB BW SRA Run Selector	Gene Yeo	Aug 10, 2017
GSE112782	The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [CLIP-Seq]	Expression profiling by high throughput sequencing Other	Homo sapiens	10	BB BED BW CSV SRA Run Selector	En-Ching Luo	Oct 16, 2019
GSE113394	Nucleotide resolution of RNA polymerase II transcription in human cytomegalovirus	Other	Homo sapiens	13	BB BW SRA Run Selector	David H Price	Jan 16, 2019
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE131160	BEN-solo factors partition active chromatin to ensure proper gene activation in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	59	BB BW XLSX SRA Run Selector	Jiayu Wen	Nov 04, 2019
GSE159326	POINT technology illuminates the processing of polymerase-associated intact nascent transcripts	Other	Homo sapiens	78	BB BW SRA Run Selector	Rui Sousa-Luís	Mar 19, 2021