GEO Browser - GEO

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431 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other			NARROWPEAK
GSE75356	A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens	48	BW NARROWPEAK	Leonard Zon	Feb 01, 2016
GSE76420	LncRNA DINO guides DNA damage signaling	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED NARROWPEAK	Adam Schmitt	Dec 30, 2015
GSE76481	Cell-of-origin specific 3D genome structure acquired during somatic cell reprogramming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	85	NARROWPEAK TXT	Elzo de Wit	Mar 01, 2016
GSE125641	Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	40	BED CEL NARROWPEAK	Amanda Khoury	Nov 18, 2019
GSE55581	Diet-induced chromatin remodeling in mice livers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED BEDPE DIFF NARROWPEAK SRA Run Selector	Amy Leung	Jul 17, 2014
GSE70226	rDNA chromatin interactions in the MYC-driven Eµ-Myc transgenic mouse model of B-cell lymphoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	25	CSV NARROWPEAK TXT	Jeannine Diesch	Feb 06, 2019
GSE76688	G-quadruplex structures mark human regulatory chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	52	NARROWPEAK TXT SRA Run Selector	Dario Beraldi	Aug 05, 2016
GSE76922	Comprehensive molecular phenotypic effects of the large deletion on chromosome 22q11.2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	59	BROADPEAK FPKM_TRACKING NARROWPEAK TXT SRA Run Selector	Xianglong Zhang	Sep 05, 2017
GSE78172	DSBCapture: in situ capture and direct sequencing of dsDNA breaks	Expression profiling by high throughput sequencing Other	Homo sapiens	11	BED BEDGRAPH NARROWPEAK TDF TXT SRA Run Selector	Giovanni Marsico	Jul 18, 2016
GSE81274	Chromatin accessibility maps of chronic lymphocytic leukemia identify subtype-specific epigenome signatures and transcription regulatory networks	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	138	BIGWIG CSV NARROWPEAK	Christoph Bock	Jun 26, 2016
GSE85066	In vitro cultured H7 human embryonic stem cells (WiCell) and H7-derived downstream early mesoderm progenitors	Expression profiling by high throughput sequencing Other	Homo sapiens	12	NARROWPEAK TXT SRA Run Selector	Rahul Sinha	Aug 02, 2016
GSE85155	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq]	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	52	BED BIGWIG NARROWPEAK SRA Run Selector	Asifa Akhtar	Mar 28, 2017
GSE90634	SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	78	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Sep 25, 2017
GSE95015	The cohesin release factor WAPL restricts chromatin loop extension.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	63	NARROWPEAK TXT WIG	Robin H. van der Weide	May 03, 2017
GSE96107	Multi-scale 3D genome rewiring during mouse neural development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	92	BW NARROWPEAK TAR TXT SRA Run Selector	Boyan Bonev	Oct 18, 2017
GSE96693	Loss of CTCF reveals basic properties of post-mitotic epigenomes and induces heart failure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	17	GTF HIC NARROWPEAK	Tom Vondriska	Aug 30, 2017
GSE97669	Promoter of lncRNA gene PVT1 is a tumor suppressor DNA element	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	267	BW NARROWPEAK TXT	Howard Y. Chang	May 31, 2018
GSE98119	The energetics and physiological impact of cohesin extrusion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98509	MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Homo sapiens	16	BED BW CSV NARROWPEAK TXT SRA Run Selector	Alessandra Dall'Agnese	Sep 10, 2019
GSE101791	CBFb-SMMHC inhibition triggers apoptosis by disrupting MYC chromatin dynamics in acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	20	BW NARROWPEAK TXT	Lucio Castilla	May 02, 2018