7502 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE54296
Transcription Factor Highly Occupied Target (HOT) Regions of 145 Cell Lines
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Wenjie Shu Jan 14, 2015
GSE72697
Structural organization of the inactive X chromosome
8 Bryan R Lajoie Jul 18, 2016
GSE76967
A broad RNA virus survey reveals dependence on host miRNAs and specific sequestration modulating the cellular transcriptome
103 Troels K H Scheel Jan 20, 2016
GSE80795
CpG island mediated linear and spatial gene partitioning (other data sets)
Jonghwan Kim Feb 15, 2018
GSE85977
High-resolution Comparative Analysis Reveals a Primitive 3D Genome in Embryonic Stem Cells
4 Fulai Jin Aug 31, 2017
GSE87112
A Compendium of Chromatin Contact Maps Reveal Spatially Active Regions in the Human Genome
19 Anthony D Schmitt Nov 15, 2016
GSE93834
Compute the Significant Interactions of Hi-C data through HOMER
hebing chen May 09, 2017
GSE95797
De novo assembly of Aedes aegypti using Hi-C yields chromosome-length scaffolds
3 Olga Dudchenko Mar 24, 2017
GSE97092
The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains II (re-analysis)
Karen Reddy Mar 27, 2020
GSE98509
MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells
16 Alessandra Dall'Agnese Sep 10, 2019
GSE98530
Re-Wiring 3D Nuclear Architecture by a Single Transcription Factor during Somatic Cell Reprogramming
24 Alessandra Dall'Agnese Sep 10, 2019
GSE99991
Investigating the role of SMCHD1 in de novo X chromosome inactivation
53 Chen-Yu Wang Jun 07, 2018
GSE101715
A TAD boundary at the HoxD locus segregates opposing limb regulatory landscapes and their target genes [Hi-C]
6 Eddie Rodríguez-Carballo Dec 22, 2017
GSE115407
Robust Hi-C maps of enhancer-promoter interactions reveal the function of non-coding genome in neural development and diseases
40 Xiaoxiao Liu Jun 26, 2020
GSE116413
Unfolding the inactive X chromosome
42 Chen-Yu Wang May 03, 2019
GSE117109
Single-cell chromatin conformation capture of diploid cells by Dip-C (analyzed with the dip-c package)
61 Longzhi Tan Aug 15, 2018
GSE119805
Attenuated chromatin compartmentalization in meiosis and its maturation in sperm development
5 Satoshi H Namekawa Feb 18, 2019
GSE120751
Hi-C guided assemblies reveal conserved regulatory topologies on X and autosomes despite extensive genome shuffling [HiC]
5 Asifa Akhtar Oct 14, 2019
GSE125656
Exonuclease combinations reduce noises in 3D genomics technologies
27 Qing Li Apr 08, 2020
GSE127752
Multiplexed Cas9 targeting reveals genomic location effects and gRNA-based staggered breaks influencing mutation efficiency and patterns
49 Joana P Goncalves Mar 08, 2019