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456 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		BEDGRAPH
GSE136554	Ancient genomic regulatory blocks are a major source for gene deserts in vertebrates after whole genome duplications	Other	Branchiostoma lanceolatum Danio rerio Mus musculus	12	BEDGRAPH SRA Run Selector	Rafael Domínguez Acemel	Mar 23, 2021
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE85191	Widespread transcriptional pausing and elongation control at enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Mus musculus	37	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 09, 2018
GSE254620	Chromatin conformation capture (4C-seq) from mouse liver	Other	Mus musculus	48	BEDGRAPH	LORENA AGUILAR ARNAL	Aug 01, 2024
GSE137334	Loss of Maenli lncRNA expression causes engrailed-1 dependent congenital limb malformations [Derived Virtual 4C]	Other	Mus musculus	3	BEDGRAPH SRA Run Selector	Lila Allou	Oct 25, 2020
GSE130214	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination [3C-HTGTS]	Genome variation profiling by high throughput sequencing Other	Mus musculus	19	BEDGRAPH SRA Run Selector	Frederick W Alt	Aug 19, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE142778	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning [3C-HTGTS]	Other	Mus musculus	24	BEDGRAPH SRA Run Selector	Frederick W Alt	May 11, 2020
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE151906	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination (LAM-HTGTS)	Other	Mus musculus	48	BEDGRAPH TXT XLS SRA Run Selector	Frederick W Alt	Nov 08, 2020
GSE151909	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination (3C-HTGTS)	Other	Mus musculus	19	BEDGRAPH SRA Run Selector	Frederick W Alt	Nov 08, 2020
GSE151910	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	138	BEDGRAPH BW TXT XLS	Frederick W Alt	Nov 07, 2020
GSE152193	The physiological role of 3’CBEs in antibody class switching	Other	Mus musculus	42	BEDGRAPH BW TXT	Frederick W Alt	Jan 01, 2021
GSE162009	The physiological role of 3’CBEs in antibody class switching (3C-HTGTS)	Other	Mus musculus	12	BEDGRAPH SRA Run Selector	Frederick W Alt	Jan 01, 2021
GSE230604	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination [3C_HTGTS_Seq]	Other	Mus musculus	99	BEDGRAPH	Frederick Alt	May 30, 2023
GSE230605	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination	Expression profiling by high throughput sequencing Other	Mus musculus	132	BEDGRAPH BW TXT	Frederick Alt	May 30, 2023
GSE254039	Molecular Basis for Differential Igk Versus Igh V(D)J Joining Mechanisms [HTGTS-V(D)J-seq data]	Other	Mus musculus	108	BEDGRAPH TLX	Frederick Alt	Apr 08, 2024
GSE263123	Molecular Basis for Differential Igk Versus Igh V(D)J Joining Mechanisms [3C-HTGTS data]	Other	Mus musculus	16	BEDGRAPH TLX	Frederick Alt	Apr 08, 2024
GSE263124	Molecular Basis for Differential Igk Versus Igh V(D)J Joining Mechanisms	Other	Mus musculus	124	BEDGRAPH TLX	Frederick Alt	Apr 08, 2024