GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		BROADPEAK
GSE184498	Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis [CUT&RUN]	Other	Mus musculus	4	BROADPEAK SRA Run Selector	Ronald L. Chandler	Dec 13, 2021
GSE144412	Hi-CoP, a simple and robust assay for detecting interactions of regulatory regions	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BROADPEAK BW HIC TXT SRA Run Selector	Hao bingtao	Jan 29, 2020
GSE161596	Deletion of the helicase RTEL1 in RNA:DNA hybrids throughout the genome and how this may be affected by overexpression of the protein WT RNaseH1GFP in MEFs	Other	Mus musculus	8	BIGWIG BROADPEAK SRA Run Selector	Simon J Boulton	Jan 04, 2021
GSE210181	Probing cell identity hierarchies by fate titration and collision during direct reprogramming [Cut & Tag]	Other	Mus musculus	8	BIGWIG BROADPEAK TSV TXT	Bob Hersbach	Sep 16, 2022
GSE184499	Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis	Expression profiling by high throughput sequencing Other	Mus musculus	10	BROADPEAK TAB	Ronald L. Chandler	Dec 13, 2021
GSE241440	XIST directly regulates X-linked and autosomal genes in naïve human pluripotent cells [RAP-seq_mouse]	Other	Mus musculus	11	BEDGRAPH BROADPEAK	Kathrin Plath	Dec 15, 2023
GSE95804	The BET protein BRD2 cooperates with CTCF to enforce transcriptional and architectural boundaries	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	12	BIGWIG BROADPEAK	Gerd A Blobel	Mar 31, 2017
GSE199059	Chromatin jets define the properties of cohesin-driven in vivo loop extrusion	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BEDGRAPH BROADPEAK HIC NARROWPEAK	Ya Guo	Aug 15, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE87548	Layer-specific ATAC-seq of the neurons of adult mouse visual cortex defined by Cre-driver lines	Other	Mus musculus	20	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Lucas T Gray	Jan 01, 2017
GSE123292	Satb1 integrates DNA sequence, shape, motif density and torsional stress to selectively bind a subset of putative targets in nucleosome-dense regions of the genome	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	20	BROADPEAK BW NARROWPEAK SRA Run Selector	Jan Liphardt	May 28, 2019
GSE132898	Diploid genome architecture revealed by multi-omic data of hybrid mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	21	BROADPEAK BW TXT SRA Run Selector	Zhijun Han	Jul 05, 2020
GSE166074	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run IFNgvsCtr]	Other	Mus musculus	21	BROADPEAK NARROWPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE166075	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [Cut&Run EZH2i]	Other	Mus musculus	24	BROADPEAK WIG SRA Run Selector	Eneritz Agirre	Jan 28, 2022
GSE212438	Bidirectional changes in postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics	Other	Mus musculus	24	BROADPEAK	Anne E West	Oct 11, 2022
GSE224489	Epigenetic data during proliferation and differentiation of C2C12 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	28	BED BEDPE BIGWIG BROADPEAK BW TXT	Mingyang Hu	Feb 10, 2023
GSE161597	RTEL1 regulates G4/R-loops to avert replication-transcription collisions	Other Expression profiling by high throughput sequencing	Mus musculus	29	BIGWIG BROADPEAK	Simon J Boulton	Jan 04, 2021
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE104686	N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	35	BROADPEAK GTF TXT SRA Run Selector	Yue Li	Nov 21, 2017
GSE51337	Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis	Other	Mus musculus	42	BEDGRAPH BIGWIG BROADPEAK CEL TXT	ENCODE DCC	Nov 14, 2014