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2083 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Mus musculus		TXT
GSE59119	The contribution of cohesin-SA1 to chromatin architecture and gene expression in two murine tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	51	ZIP TXT FPKM_TRACKING SRA Run Selector	Ana Losada	Apr 07, 2015
GSE142996	DNA polymerase α interacts with H3-H4 and facilitates the transfer to parental histones to lagging strand	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Saccharomyces cerevisiae	99	ZIP TXT BW SRA Run Selector	zhiguo zhang	Sep 02, 2020
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	Mus musculus Suid alphaherpesvirus 1 unidentified plasmid	128	ZIP TXT TSV TAR CSV	Michael Wheeler	Apr 22, 2021
GSE154353	A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells	Other	Homo sapiens Mus musculus	3	ZIP TXT SRA Run Selector	Mary Villanueva Arrastia	Aug 12, 2020
GSE164153	Differences in TCR repertoire and T cell activation underlie the divergent outcomes of anti-tumor immune responses in tumor-eradicating versus tumor-progressing hosts	Expression profiling by high throughput sequencing Other	Mus musculus	19	ZIP TXT TSV RDS SRA Run Selector	Jing Hong Wang	Jan 13, 2021
GSE167381	LKB1 inactivation initiates a chromatin remodeling cascade to drive metastatic progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	441	ZIP XLSX TXT TSV RDS CSV BW SRA Run Selector	Jeffrey Michael Granja	Apr 30, 2021
GSE174554	A single cell atlas of human glioma under therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	113	ZIP TXT TSV TAR MTX BED	Aaron Diaz	Jul 05, 2022
GSE266689	Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium)	Other	Mus musculus	19	ZIP TXT TSV TIFF MTX JSON CSV	Freda D. Miller	Dec 20, 2024
GSE266690	Single cell approaches define neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination	Expression profiling by high throughput sequencing Other	Mus musculus synthetic construct	33	ZIP TXT TSV TIFF PNG MTX CSV	Freda D. Miller	Dec 19, 2024
GSE277936	Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension	Other	Mus musculus	4	ZIP TXT RDS CSV	Zhiyu Dai	Sep 30, 2024
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	XYZ TXT TSV PDB HDF5 BED SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE60240	CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	XLSX TXT BW	Danny Reinberg	Feb 26, 2015
GSE65324	microRNA expression in parotid acinar cells during terminal differentiation	Other	Mus musculus Rattus norvegicus	12	XLSX TXT	Douglas Darling	Jan 27, 2015
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	XLSX XLS TXT BW BED SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE68890	MBNL Sequestration by Toxic RNAs and RNA Mis-Processing in the Myotonic Dystrophy Brain	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	39	XLSX TXT BEDGRAPH SRA Run Selector	Maurice Swanson	Jul 30, 2015
GSE73358	Real-time quantitative PCR analysis of murine non-ischemic and ischemic wound edge	Other	Mus musculus	7	XLSX TXT	Jaideep Banerjee	Sep 24, 2015
GSE74397	N6-methyladenosine-Mediated Nuclear Export of Messenger RNA	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	38	XLSX TXT DIFF BED SRA Run Selector	Ian Roundtree	Oct 12, 2017
GSE77213	High-throughput functional comparison of promoter and enhancer activities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus unidentified plasmid	60	XLSX XLS TXT SRA Run Selector	Thomas Andy Nguyen	May 23, 2016
GSE84157	Major MLL fusion partners regulate promoter-proximal pausing and release of RNA polymerase II	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	49	XLSX XLS TXT BEDGRAPH SRA Run Selector	Gang Wei	Jun 30, 2021
GSE90466	CHD7 controls cerebellar development via Reelin	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	XLSX XLS TXT BW SRA Run Selector	Albert Basson	Jan 01, 2017