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270 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Other	Saccharomyces cerevisiae		TXT
GSE52119	Evolution of Translation Regulation in budding Yeast	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae Saccharomyces cerevisiae x Saccharomyces paradoxus Saccharomyces paradoxus	12	BED BEDGRAPH TXT SRA Run Selector	Charles Joel McManus	Dec 04, 2013
GSE61553	Transcription profiling of a S96xSK1 yeast cross and its pool of spores.	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	8	BED TXT SRA Run Selector	Daniel Magnus Bader	Feb 04, 2015
GSE63517	Break-Seq and RNA-seq analysis of gene expression during and after exposure to hydroxyurea in WT and mec1 cells in Saccharomyces cerevisiae	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	23	BED TXT	Wenyi Feng	Jan 12, 2015
GSE88952	The dynamic three-dimensional organization of the diploid yeast genome	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae Saccharomyces cerevisiae x Saccharomyces paradoxus Saccharomyces cerevisiae x Saccharomyces uvarum Saccharomyces paradoxus Saccharomyces paradoxus x Saccharomyces uvarum Saccharomyces uvarum	44	BED BEDGRAPH GFF TXT SRA Run Selector	Seungsoo Kim	Dec 05, 2016
GSE109343	Lso2 is a conserved ribosome-bound protein required for translational recovery in yeast	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	25	BED BEDGRAPH FASTA GFF TXT WIG SRA Run Selector	Yinuo Wang	Sep 12, 2018
GSE110218	Endogenous single-strand DNA breaks at RNA polymerase II promoters in Saccharomyces cerevisiae	Other	Saccharomyces cerevisiae	3	BED TXT WIG	Halasz Laszlo	Aug 04, 2018
GSE114444	Effect of top2 and hmo1 on chromatin architecture and transcription in yeast	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	18	BED BEDGRAPH TXT SRA Run Selector	Mohamood Adhil Mohammed Iqbal	Jul 02, 2018
GSE115897	Separable recruitment of DNA Polymerase α for leading- and lagging-strand replication initiation	Other	Saccharomyces cerevisiae	70	BED TXT XLS SRA Run Selector	Duncan Smith	Jun 16, 2018
GSE118118	A combination of transcription factors mediates inducible interchromosomal contacts	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae Saccharomyces cerevisiae x Saccharomyces uvarum synthetic construct	123	BED BEDGRAPH FA GFF TXT SRA Run Selector	Seungsoo Kim	Aug 05, 2018
GSE120605	Condensin-dependent chromatin condensation represses transcription globally during quiescence [Micro-C XL]	Other	Saccharomyces cerevisiae	4	BED TXT SRA Run Selector	Sarah G. Swygert	Dec 27, 2018
GSE124863	TCP-seq of yeast initiation factor mutants	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	28	BED TSV TXT SRA Run Selector	Stuart Kenneth Archer	Mar 06, 2019
GSE139860	Replication-fork arrest at tRNA genes in S. cerevisiae does not require tRNA transcription and is facilitated by topoisomerases and Rad18-dependent repair pathways	Other	Saccharomyces cerevisiae	33	BED BEDPE TXT SRA Run Selector	Duncan Smith	Nov 02, 2019
GSE141975	Structural clusters of histone H3 and H4 residues regulate chronological lifespan in Saccharomyces cerevisiae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Saccharomyces cerevisiae	62	BED TXT WIG	Hugh Patterton	Dec 13, 2019
GSE156133	Widespread transcriptional readthrough caused by Nab2 depletion leads to chimeric transcripts with retained introns	Other	Saccharomyces cerevisiae	24	BED TAR TXT SRA Run Selector	Tara Diane Alpert	Oct 27, 2020
GSE235068	Impact of 5-methylcytosine (5mC) on UV-induced CPD formation	Other	Saccharomyces cerevisiae	9	BED TXT	John J. Wyrick	Aug 15, 2023
GSE242400	DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Saccharomyces cerevisiae	82	BED BIGWIG COOL MATRIX TXT	Lu Bai	Sep 05, 2023
GSE260753	RPA and Rad27 limit templated and inverted insertions at DNA breaks	Other	Saccharomyces cerevisiae	52	BED TXT	Xin Wang	Mar 07, 2024
GSE21739	Comprehensive comparative analysis of strand-specific RNA sequencing methods	Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	15	BEDGRAPH TXT SRA Run Selector	Joshua Z Levin	Aug 15, 2010
GSE74454	Synchronized translation programs across cellular compartments	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	36	BEDGRAPH TXT WIG XLSX SRA Run Selector	Mary T Couvillion	May 11, 2016
GSE124132	Yeast sirutin family members maintain trannscription homeostasis to ensure genome stability	Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae	27	BEDGRAPH BW TXT XLSX SRA Run Selector	Jessica Lauren Feldman	May 04, 2019