46 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE249494
Integrated analyses highlight interactions between the 3D-genome and DNA, RNA, and epigenomic alterations in metastatic prostate cancer
  • Other
  • Link icon Homo sapiens
80 Felix Feng May 16, 2024
GSE242863
EWS-WT1 fusion isoforms establish oncogenic programs and therapeutic vulnerabilities in Desmoplastic Small Round Cell Tumors [Hi-C]
  • Other
  • Link icon Homo sapiens
1 Rui Dong Oct 04, 2023
GSE234396
Clusters of lineage-specific genes are anchored by ZNF274 in repressive perinucleolar compartments
  • Link icon Homo sapiens
114 Julien Duc Sep 17, 2024
GSE234314
Clusters of lineage-specific genes are anchored by ZNF274 in repressive perinucleolar compartments [Hi-C and UMI4C]
  • Other
  • Link icon Homo sapiens
22 Julien Duc Sep 17, 2024
GSE233166
Low-input Hi-C library construction
  • Other
  • Link icon Homo sapiens
7
  • Download icon MATRIX
Yanyi Huang Jul 19, 2023
GSE231861
DARTseq identifies m6A targets in human CD34+ HSPCs
  • Other
  • Link icon Homo sapiens
9
  • Download icon MATRIX
Michael G. Kharas Dec 07, 2023
GSE231485
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [HiC]
  • Other
  • Link icon Homo sapiens
8 Julie Thoms Aug 21, 2023
GSE227941
The nucleoskeleton protein NuMA maintains local chromatin architecture partially through promoting linker histone H1’ binding to chromatin and nucleosome stacking
  • Link icon Homo sapiens
21 Wenxue Zhao Mar 01, 2024
GSE227705
The nucleoskeleton protein NuMA maintains local chromatin architecture partially through promoting linker histone H1’ binding to chromatin and nucleosome stacking [Hi-C]
  • Other
  • Link icon Homo sapiens
4
  • Download icon MATRIX
Wenxue Zhao Mar 01, 2024
GSE221427
Epigenetic and transcriptomic alterations in key inflammatory pathways are established in RUNX1 deficient hematopoietic progenitors and are propagated to neutrophils.
55 Alexandra Zezulin Jul 12, 2023
GSE214594
Coordination of widespread transcription at enhancers and target genes through BRD4
  • Link icon Homo sapiens
31 Dr. Andreas Mayer Jul 06, 2023
GSE214591
Coordination of widespread transcription at enhancers and target genes through BRD4 (HiChIP)
  • Other
  • Link icon Homo sapiens
6 Dr. Andreas Mayer Jul 06, 2023
GSE212979
EWS-WT1 fusion isoforms establish oncogenic programs and therapeutic vulnerabilities in Desmoplastic Small Round Cell Tumors
  • Link icon Homo sapiens
114 Rui Dong Oct 04, 2023
GSE211776
Genome wide enhancer loops (HiChIP) and 3-D high order chromatin features associated with EWS-FLI1 in Ewing Sarcoma. [microC]
  • Other
  • Link icon Homo sapiens
2 Rui Dong Mar 16, 2023
GSE211246
Haplotype-specific chromatin looping reveals genetic interactions of regulatory regions modulating gene expression in 8p23.1
  • Other
  • Link icon Homo sapiens
14 Iouri Chepelev Sep 07, 2022
GSE210504
N-acetyltransferase NAT10 Controls Cell Fates via RNA Cytidine Acetylation
  • Link icon Homo sapiens
44 Saiyong Zhu Nov 11, 2023
GSE199832
KLF4 Recruits SWI/SNF to Increase Chromatin Accessibility and Reprogram the Endothelial Enhancer Landscape under Laminar Shear Stress [HiChIP2]
  • Other
  • Link icon Homo sapiens
4 Jan-Renier Moonen Apr 02, 2022
GSE198413
Nuclear Lamina binds the EBV genome during latency and regulates viral gene expression
14
  • Download icon MATRIX
Priyankara J Wickramasinghe Mar 11, 2022
GSE198412
Nuclear lamina binds the EBV genome during latency and regulates viral gene expression [Hi-C]
  • Other
4 Priyankara J Wickramasinghe Apr 08, 2022
GSE190324
RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of pre-mRNAs
104 Kate Meyer Aug 30, 2022