3124 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE103693
The Identification and Characterization of Sindbis Virus RNA:Host Protein Interactions
  • Link icon Homo sapiens
5 Kevin J Sokoloski Jan 02, 2018
GSE31105
Chromatin Conformation Capture in two biological replicates of K562 cells to identify interactions between tRNA genes in human cells.
  • Other
  • Link icon Homo sapiens
2 Jesse Raab Oct 10, 2011
GSE33664
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation
  • Link icon Homo sapiens
10 Guoliang Li Jan 20, 2012
GSE63269
Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 50 cells per microliter
2 Evan Macosko May 20, 2015
GSE66693
Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 12.5 cells per microliter
1 Evan Macosko May 20, 2015
GSE69584
Target discrimination in nonsense-mediated mRNA decay requires Upf1 ATPase activity (CLIP-Seq)
  • Other
  • Link icon Homo sapiens
6 Gene Yeo Jul 06, 2015
GSE75183
Principles for RNA metabolism and alternative transcription initiation within closely spaced promoters
  • Other
  • Link icon Homo sapiens
2 Aino Inkeri Järvelin May 13, 2016
GSE109003
Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity
  • Link icon Homo sapiens
10 Steven West Feb 13, 2018
GSE148448
Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells
  • Other
27 Robi D Mitra Jul 23, 2020
GSE164779
Hierarchical chromatin regulation during blood formation uncovered by single-cell sortChIC
  • Other
106 Jake Yeung Nov 30, 2021
GSE166483
Cataloging human PRDM9 variability utilizing long-read sequencing technologies reveals PRDM9 population-specificity and two distinct groupings of related alleles
  • Link icon Homo sapiens
18 Kevin Brick Oct 26, 2021
GSE77629
Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - 293T cells]
  • Other
  • Link icon Homo sapiens
24 Gene Yeo Mar 28, 2016
GSE77633
Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [iCLIP]
  • Other
  • Link icon Homo sapiens
1 Gene Yeo Mar 28, 2016
GSE80039
Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites [eCLIP - HepG2/K562 cells]
  • Other
  • Link icon Homo sapiens
63 Gene Yeo Apr 07, 2016
GSE81553
TSA-Seq Mapping of Nuclear Genome Organization [seq]
  • Other
  • Link icon Homo sapiens
43 Andrew S Belmont Apr 25, 2018
GSE86035
SONAR discovers RNA binding proteins from analysis of large-scale protein-protein interactomes.
  • Other
  • Link icon Homo sapiens
17 Gene Yeo Oct 06, 2016
GSE101938
Variation in single-nucleotide sensitivity of eCLIP derived from reverse transcription conditions
  • Other
  • Link icon Homo sapiens
62 Gene Yeo Aug 10, 2017
GSE112782
The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [CLIP-Seq]
  • Link icon Homo sapiens
10 En-Ching Luo Oct 16, 2019
GSE113394
Nucleotide resolution of RNA polymerase II transcription in human cytomegalovirus
  • Other
  • Link icon Homo sapiens
13 David H Price Jan 16, 2019
GSE159326
POINT technology illuminates the processing of polymerase-associated intact nascent transcripts
  • Other
  • Link icon Homo sapiens
78 Rui Sousa-Luís Mar 19, 2021