Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions

Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence

Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 50 cells per microliter

Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets

Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3) cells (1000/100 STAMPs) at 12.5 cells per microliter

Self-reporting transposons enable simultaneous readout of gene expression and transcription factor binding in single cells

Hierarchical chromatin regulation during blood formation uncovered by single-cell sortChIC

Cataloging human PRDM9 variability utilizing long-read sequencing technologies reveals PRDM9 population-specificity and two distinct groupings of related alleles

Massively parallel saturation genome editing of an essential mitochondrial targeting sequence (Tn5)

Massively parallel saturation genome editing of an essential mitochondrial targeting sequence

Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription

Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer

Whole Genome sequencing of a normal karyotype AML cell line

KMT2D regulates gene expression through regulating promoters/enhances upon glucose deprivation.

mRNP-mRNA Association Map (Tier I - G10, HuR, Imp, PABP)

Chromatin Interactions by 5C from ENCODE/Dekker Univ. Mass.

Genome-wide Analysis of Chromatin Interactions in Human Cells

H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation

Global analysis of alternative splicing regulated by RBM10