GEO Browser - GEO

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224 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing			BED
GSE15286	Epigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Zea mays	14	BED FA TXT SRA Run Selector	Xiangfeng Wang	Apr 28, 2009
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE19602	Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids.	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Oryza sativa	24	BED TAR SRA Run Selector	guangming he	Jan 20, 2010
GSE19991	A large fraction of extragenic RNA Pol II transcription sites overlap enhancers (2)	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	3	BED TXT SRA Run Selector	Iros Barozzi	May 21, 2010
GSE20664	Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoans	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	3	BED TXT SRA Run Selector	Ryan J Taft	Jul 01, 2010
GSE20683	RNA profiling in mouse haemopoiesis	Non-coding RNA profiling by high throughput sequencing	Mus musculus	1	BED TXT SRA Run Selector	Ryan J Taft	Jul 01, 2010
GSE20751	Genome-wide analysis of snRNAs bound to Gemin5 upon protein synthesis inhibition	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	1	BED SRA Run Selector	Jeongsik Yong	Jun 24, 2010
GSE20942	Characterization of miRNA transcriptome of skeletal muscle from broiler and layer chicken lines by deep sequencing	Non-coding RNA profiling by high throughput sequencing	Gallus gallus	2	BED TXT SRA Run Selector	Tingting Li	Mar 18, 2011
GSE21736	Novel viruses naturally infecting Caenorhabditis nematodes trigger a small RNA response	Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	2	BED SRA Run Selector	Leonard Goldstein	Jan 01, 2011
GSE25022	sRNA populations of 2 week old seedlings from Arabidopsis ecotypes C24, Ler, and their two reciprocal F1 hybrids	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	4	BED TXT SRA Run Selector	Michael Groszmann	Jan 12, 2011
GSE26251	Somatic activity of the piRNA pathway in the mouse	Non-coding RNA profiling by high throughput sequencing	Mus musculus	3	BED SRA Run Selector	Dario Boffelli	Dec 31, 2014
GSE27443	RNA-Seq of rRNA depleted circulating endothelial progenitor cells (cEPCs) in trisomy 21 and euploid samples	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	2	BED BEDGRAPH TXT	Valerio Costa	May 05, 2011
GSE27837	Small RNA sequences from Schizosaccharomyces japonicus	Non-coding RNA profiling by high throughput sequencing	Schizosaccharomyces japonicus	2	BED FA	Matthew Wayne Vaughn	Mar 09, 2011
GSE27979	MiRNA expression profiles from adult mouse frontal cortex and hippocampus	Non-coding RNA profiling by high throughput sequencing	Mus musculus	12	BED TXT	Iiris Hovatta	Jun 22, 2011
GSE28080	Identification of long non-protein coding RNAs in chicken skeletal muscle by Solexa sequencing	Non-coding RNA profiling by high throughput sequencing	Gallus gallus	1	BED BEDGRAPH	Tingting Li	Feb 20, 2012
GSE28617	Function, targets and evolution of Caenorhabditis elegans piRNAs (small RNA-Seq)	Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	7	BED SRA Run Selector	Leonard Goldstein	Jun 18, 2012
GSE28866	Transcriptional profiling of lncRNAs and novel transcribed regions across a diverse panel of archived human cancers	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	99	BED TXT SRA Run Selector	Robert B. West	Aug 24, 2012
GSE29116	Small RNA profiles from human genic regions suggest biogenic mechanisms and identify new Argonaute-associated species	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	10	BED SRA Run Selector	Eivind Valen	Jul 31, 2011
GSE29943	Unstressed HeLa cells and ELAVL1/HuR knock down conditions: polyA RNA-Seq, small RNA-Seq, and PAR-CLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	9	BED TXT WIG SRA Run Selector	Marvin Jens	Jun 30, 2011