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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterNon-coding RNA profiling by high throughput sequencing Remove filterOryza sativa Japonica Group Remove filterSRA Run Selector
GSE63367
Expression profiling of small RNAs in wild type and Osaba1-1 rice seedlings
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
2 Qiu Jin-Long May 31, 2015
GSE108527
DDM1 represses noncoding RNA expression and RNA-directed DNA methylation in heterochromatin
  • Link icon Oryza sativa Japonica Group
3
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Feng Tan Jun 06, 2018
GSE76798
Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants (I)
  • Non-coding RNA profiling by high throughput sequencing
4 Dong Wang Jan 21, 2017
GSE154500
The Rise and Fall of Billionaire siRNAs during Reproductive Development in Rice
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
4 Lili Wang Jan 02, 2023
GSE79344
Comparative small RNA analysis of pollen development in autotetraploid and diploid rice
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
6 andyslee Li Nov 04, 2016
GSE156244
Non-coding RNAs in the interaction between rice and Meloidogyne graminicola
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
6 Bruno Verstraeten Jul 28, 2021
GSE186406
The rise and fall of billionaire siRNAs during reproductive development in rice [sRNA-seq]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
6 Lili Wang Jan 02, 2023
GSE65149
Rice interploidy crosses disrupt epigenetic regulation, gene expression, and seed development
  • Link icon Oryza sativa Japonica Group
7 Limei Wang Aug 31, 2018
GSE130166
Reinforcement of DNA methylation in CHH context through RNA-directed DNA methylation ensures sexual reproduction in rice [sRNA-seq]
  • Non-coding RNA profiling by high throughput sequencing
7 Lili Wang Jul 21, 2021
GSE102747
Down-regulated expression of OsDCL3b affects small RNA biogenesis and panicle development in rice
  • Link icon Oryza sativa Japonica Group
8 Dong Wang Apr 12, 2019
GSE38480
Transcriptome and methylome interactions in rice hybrids
12 Blake C. Meyers Jul 10, 2012
GSE69242
Next Generation Sequencing Facilitates Small RNA Mediated Rice Resistance to Xoo
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
16 hanming hong Feb 25, 2016
GSE90479
Analysis of small RNAs revealed differential expressions during the development of pollen and embryo sac and their targets may associate with fertility in autotetraploid rice
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
16 andyslee Li Mar 09, 2017
GSE81436
The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome
  • Link icon Oryza sativa Japonica Group
17 chao zhou Jun 13, 2016
GSE71925
Variation in the expression of miRNAs and mRNAs in rice (Oryza sativa)
18 Munan Xie Feb 09, 2017
GSE131003
Integrated analysis of microRNA and mRNA expression profiles of rice seedlings in response to zinc deficiency and recovery (miRNA-seq)
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
18 Houqing Zeng Jan 08, 2020
GSE131319
Control of Rice Tillering by RNA-directed DNA Methylation at Miniature Inverted-repeat Transposable Elements
  • Link icon Oryza sativa Japonica Group
18 Yijun Qi Mar 16, 2020
GSE141995
Characteristic dissection of Xanthomonas oryzae pv. oryzae responsive microRNAs in rice [datatset 2]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
18 yanfeng jia Mar 16, 2020
GSE30583
Expression data from rice leaves treated or not with fungal elicitors and high-throughput pyrosequencing of endogenous small RNAs from Oryza sativa
20 Sonia Campo Jan 15, 2014
GSE36696
Comparative transcriptome analysis of transporters, phytohormone and lipid metabolism pathways in response to arsenic stress in rice (Oryza Sativa L.)
  • Link icon Oryza sativa Japonica Group
20 Lujun Yu Jan 09, 2013