39 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterNon-coding RNA profiling by high throughput sequencing Remove filterSolanum lycopersicum
GSE53253
3’ and 5’ end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs [Solanum lycopersicum]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
2 Dinesh Gupta Oct 24, 2015
GSE53688
3' and 5' end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs
  • Non-coding RNA profiling by high throughput sequencing
20 Dinesh Gupta Oct 24, 2015
GSE50085
Characterization and function of Tomato yellow leaf curl virus-derived small RNAs generated in the tolerant and susceptible tomato varieties using deep sequencing
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
10 Miao Bai Aug 22, 2016
GSE28755
Comparative sequence analysis of plant small RNAs
  • Non-coding RNA profiling by high throughput sequencing
99 Emanuele De Paoli May 10, 2011
GSE102579
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum (rdr6 mutant) without TAP treatment
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tamas Dalmay Oct 01, 2019
GSE102581
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum with TAP treatment
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tamas Dalmay Oct 20, 2018
GSE102576
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum without TAP treatment
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tamas Dalmay Sep 01, 2019
GSE42784
Comparison of tomato fruit gene expression data obtained by microarray analysis and by treatment of degradome sequencing data as an RNAseq experiment
  • Link icon Solanum lycopersicum
13 Ruud A de Maagd Apr 05, 2013
GSE234786
Detection of plant microRNAs in edible-plant based products
  • Non-coding RNA profiling by high throughput sequencing
8 Fermín Ignacio Milagro Yoldi Sep 05, 2023
GSE254910
Exogenous Melatonin RegulatesAlternaria brassicaeReproduction and Pathogenicity in a Dose-Dependent Manner [miRNA]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
6 Tang wenkun Feb 07, 2024
GSE93648
Gene family Diversification in conserved miRNAs target sites in Tomato revealed as layers of interaction with a nuclear-replicating virus.
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Vitantonio Pantaleo Sep 28, 2018
GSE52265
Generation and characterization of a tomato DCL3 silencing mutant
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tzahi Arazi Mar 31, 2014
GSE121089
Genome wide identification of circRNAs, miRNAs and their targets in tomatoes at heat, drought and their combination
  • Non-coding RNA profiling by high throughput sequencing
  • Other
  • Link icon Solanum lycopersicum
36 Rong Zhou Feb 20, 2020
GSE75922
Genome-wide analysis of Alternaria stress-responsive microRNAs in tomato
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Pallob Kundu May 20, 2016
GSE102781
Genome-wide comparative analysis in Solanaceae plants reveals evolution of novel miRNAs targeting defense genes in Capsicum spp.
  • Other
  • Non-coding RNA profiling by high throughput sequencing
6 Chanseok Shin Jul 18, 2018
GSE45321
Genome-wide high-throughput small RNA sequence analysis of B. cinerea-infected tomato leaf and fruit
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
6 Hailing Jin Mar 11, 2014
GSE87651
Genome-wide identification and characterization of miRNAome from tomato roots (Solanum lycopersicum) and root-knot nematode (Meloidogyne incognita) during susceptible and resistant interactions.
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
11 Gopal Joshi Jun 12, 2017
GSE51959
Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tzahi Arazi Nov 01, 2013
GSE152570
Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants
54 Hardik Kundariya Sep 20, 2020
GSE12081
High-throughput pyrosequencing of endogenous small RNAs from Solanum lycopersicum leaf and fruit
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
2 Frank Schwach Aug 22, 2008