| Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
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Non-coding RNA profiling by high throughput sequencing
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Solanum lycopersicum
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| GSE53253 |
3’ and 5’ end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs [Solanum lycopersicum]
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2 | Dinesh Gupta | Oct 24, 2015 | ||
| GSE53688 |
3' and 5' end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs
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20 | Dinesh Gupta | Oct 24, 2015 | ||
| GSE244009 |
An improved terminal ribose-modified small RNA sequencing (TRM-sRNA-seq) reveals novel features of miRNA modification and identifies HEN1-independent 2’-O-modified sRNAs derived from tRNAs
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54 | Susu Chen | Sep 11, 2024 | ||
| GSE50085 |
Characterization and function of Tomato yellow leaf curl virus-derived small RNAs generated in the tolerant and susceptible tomato varieties using deep sequencing
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10 | Miao Bai | Aug 22, 2016 | ||
| GSE28755 |
Comparative sequence analysis of plant small RNAs
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99 | Emanuele De Paoli | May 10, 2011 | ||
| GSE102579 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum (rdr6 mutant) without TAP treatment
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4 | Tamas Dalmay | Oct 01, 2019 | ||
| GSE102581 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum with TAP treatment
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4 | Tamas Dalmay | Oct 20, 2018 | ||
| GSE102576 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum without TAP treatment
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4 | Tamas Dalmay | Sep 01, 2019 | ||
| GSE42784 |
Comparison of tomato fruit gene expression data obtained by microarray analysis and by treatment of degradome sequencing data as an RNAseq experiment
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13 | Ruud A de Maagd | Apr 05, 2013 | ||
| GSE234786 |
Detection of plant microRNAs in edible-plant based products
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8 | Fermín Ignacio Milagro Yoldi | Sep 05, 2023 | ||
| GSE273943 |
Developmentally regulated generation of a systemic signal for long-lasting defence priming in tomato [small RNA-seq]
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12 | Marco Catoni | Nov 17, 2024 | ||
| GSE254910 |
Exogenous Melatonin RegulatesAlternaria brassicaeReproduction and Pathogenicity in a Dose-Dependent Manner [miRNA]
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6 | Tang wenkun | Feb 07, 2024 | ||
| GSE93648 |
Gene family Diversification in conserved miRNAs target sites in Tomato revealed as layers of interaction with a nuclear-replicating virus.
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4 | Vitantonio Pantaleo | Sep 28, 2018 | ||
| GSE52265 |
Generation and characterization of a tomato DCL3 silencing mutant
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4 | Tzahi Arazi | Mar 31, 2014 | ||
| GSE121089 |
Genome wide identification of circRNAs, miRNAs and their targets in tomatoes at heat, drought and their combination
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36 | Rong Zhou | Feb 20, 2020 | ||
| GSE75922 |
Genome-wide analysis of Alternaria stress-responsive microRNAs in tomato
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4 | Pallob Kundu | May 20, 2016 | ||
| GSE102781 |
Genome-wide comparative analysis in Solanaceae plants reveals evolution of novel miRNAs targeting defense genes in Capsicum spp.
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6 | Chanseok Shin | Jul 18, 2018 | ||
| GSE45321 |
Genome-wide high-throughput small RNA sequence analysis of B. cinerea-infected tomato leaf and fruit
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6 | Hailing Jin | Mar 11, 2014 | ||
| GSE87651 |
Genome-wide identification and characterization of miRNAome from tomato roots (Solanum lycopersicum) and root-knot nematode (Meloidogyne incognita) during susceptible and resistant interactions.
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11 | Gopal Joshi | Jun 12, 2017 | ||
| GSE51959 |
Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant
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4 | Tzahi Arazi | Nov 01, 2013 |
