21 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterNon-coding RNA profiling by high throughput sequencing Remove filterSolanum lycopersicum Remove filterTXT
GSE53253
3’ and 5’ end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs [Solanum lycopersicum]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
2 Dinesh Gupta Oct 24, 2015
GSE76204
Small RNA sequencing in tomato roots with and without Rhizophagus irregularis
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
2 Ping Wu Jul 20, 2016
GSE32470
High-throughput sequencing of small RNAs in Solanum lycopersicum
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
3
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Emanuele De Paoli Sep 30, 2011
GSE69225
Large scale sequencing of viroid derived small RNA in Potato spindle tuber viroid infected tomato plants
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
3 Charith Raj Adkar-Purushothama May 27, 2015
GSE225319
MicroRNAs Associated with AGL6 and IAA9 function in tomato fruit set
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
3
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Nicola Vitulo Feb 19, 2023
GSE42661
Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Ruud A de Maagd Apr 05, 2013
GSE51959
Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tzahi Arazi Nov 01, 2013
GSE52265
Generation and characterization of a tomato DCL3 silencing mutant
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Tzahi Arazi Mar 31, 2014
GSE56974
Identification of MicroRNAs and Their Targets in Tomato Infected with Cucumber Mosaic Virus
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Junli Feng Oct 20, 2014
GSE75922
Genome-wide analysis of Alternaria stress-responsive microRNAs in tomato
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Pallob Kundu May 20, 2016
GSE45321
Genome-wide high-throughput small RNA sequence analysis of B. cinerea-infected tomato leaf and fruit
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
6 Hailing Jin Mar 11, 2014
GSE246017
RNA polymerase IV is essential for tomato embryo development through mediating non-CG methylation [sRNA-seq]
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
6
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Ling Tong Liu Oct 01, 2024
GSE142733
Systematic identification of long non-coding RNAs under allelopathic interference of PHBA in S. lycopersicum
  • Link icon Solanum lycopersicum
9 Liang Guoting Dec 31, 2019
GSE87651
Genome-wide identification and characterization of miRNAome from tomato roots (Solanum lycopersicum) and root-knot nematode (Meloidogyne incognita) during susceptible and resistant interactions.
  • Non-coding RNA profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
11 Gopal Joshi Jun 12, 2017
GSE116095
Identification of Exosome-Like Nanoparticle Derived MicroRNAs from Eleven Edible Plants
  • Non-coding RNA profiling by high throughput sequencing
11 Juan Xiao Jun 25, 2018
GSE53688
3' and 5' end modifications in plant microRNA post biogenesis: evidences from NGS of small RNAs
  • Non-coding RNA profiling by high throughput sequencing
20
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Dinesh Gupta Oct 24, 2015
GSE97206
Paramutation of natural epialleles in tomato [sRNA]
  • Non-coding RNA profiling by high throughput sequencing
31 Quentin Gouil Aug 18, 2017
GSE97247
Paramutation of natural epialleles in tomato
39
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Quentin Gouil Aug 18, 2017
GSE152570
Heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants
54
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Hardik Kundariya Sep 20, 2020
GSE244009
An improved terminal ribose-modified small RNA sequencing (TRM-sRNA-seq) reveals novel features of miRNA modification and identifies HEN1-independent 2’-O-modified sRNAs derived from tRNAs
  • Non-coding RNA profiling by high throughput sequencing
54
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Susu Chen Sep 11, 2024